Sequence 1: | XP_021330047.1 | Gene: | cacna1aa / 562059 | ZFINID: | ZDB-GENE-040724-26 | Length: | 2371 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2385 | Identity: | 553/2385 - (23%) |
---|---|---|---|
Similarity: | 917/2385 - (38%) | Gaps: | 750/2385 - (31%) |
- Green bases have known domain annotations that are detailed below.
Zfish 65 FTVNRSLFIFSEDNFVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERLEDT 129
Zfish 130 EPYFIGIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTGILSTVGSDF-DLRTLRAVRVL 193
Zfish 194 RPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLEFYMGKFHTTCFDK------ 252
Zfish 253 ---ITDEIRE----------------EFP-CGEEVPARICPNGTVC-KKYWLGPNYGITQFDNIL 296
Zfish 297 FAVLTVFQCITMEGWTDLLYYSNDAAGSAWNWMYFIPLIIIGSFFMLNLVLGVLSGEF------A 355
Zfish 356 KERERVE----NRSEFLKLKRQQQIERELNGYLE----------------------WICKAEEVI 394
Zfish 395 LADEDNDPDDR----------------------------------------------MPFD---- 409
Zfish 410 -------------------GSRRRP----TIKKSKTDLLDAEDGD------------------GD 433
Zfish 434 IGSPF-------------ARGSL-------------KSSKL------------------------ 448
Zfish 449 ----------------------------------------------------------------- 448
Zfish 449 -----------EGSSFHKKERRLRFFIRRI------------VKTQAF-----------YWTVLC 479
Zfish 480 LVGLNTLCVAVVHYDQPETLSDFLYFAEFIFLGIFMSEMCIKMYGLGTRPYFHSSFNCFDCIVIC 544
Zfish 545 GSIFEVLWAMIQPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLL-NSMKSIISLLFLLFLF 608
Zfish 609 IVVFALLGMQLFGGQFN-----FEAG-TPPTNFDTFPAAIMTVFQILTGEDWNMVMYDGIESQGG 667
Zfish 668 VKKGMVFSV-FFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEQAANKKMALQTAKEVA 731
Zfish 732 EVSPLSAANLSIAAVTVNSERLDATEHFLDCKEQQKNHKGCKSVWEQRTSELRRQTLVNSREALY 796
Zfish 797 NELDPEDRWKVSYSRHIRPDMKTHLDRPLVVDPQENRNNNTN-------------KTRPGDGQPQ 848
Zfish 849 HSHQ------LLHKQPNFNEAETGGGGGSESWPALE--RGDSTGSRRSLLGSEHYEEGRESHRRH 905
Zfish 906 QHSQHCSQARQHRKAAEGGGEPGGRRHRSKAKERGPECEHSDGGERKHRRHRHEGEGRKERGVRH 970
Zfish 971 RNRRDGHASGPTLSTTRPIQKTLSRQDSQYSEDLDNAMNNKLATQPHDSLLNLANTAHSAGLAHT 1035
Zfish 1036 GTESSLILTNPSSTIANVTSIGHLGMKPEYTAVDIPPMFPSSNAILQVNKNANTEPLPKKEDTKG 1100
Zfish 1101 DDDDDEKDDGGPKPMPPYTSMFILTTTNPF-------RRLCHYIVTLRYFEMCILLVIAMSSIAL 1158
Zfish 1159 AAEDPVWPESP-RNNVLRYFDYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGAL 1222
Zfish 1223 VAF-AFTGGSGGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYM 1286
Zfish 1287 LFMFIFAVVAVQLFKGRFFYCTDESKEFERDCRGEYLVYE---RDNEVRSQKREWKKYDFHYDNV 1348
Zfish 1349 LWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIF---YVVYFVVF-PFFFVNIFV 1409
Zfish 1410 ALIIITFQEQGDK--------MMEDYSLEKNERACIDFAINAKPLTRHMPQNKQTFQYRMWEFVV 1466
Zfish 1467 SPPFEYTIMALIALNTIVLMM-KYDGASLTYEDVLKYLNIVFTSLFSMECILKIIAFGALNYFKD 1530
Zfish 1531 AWNIFDCVTVLGSITDILVTELGMNNFINLSFLRLFRAA---RLIKLLRQGETIRILLWTFVQSF 1592
Zfish 1593 KALPYVCLLIAMLFFIYAIIGMQLFGNIKIEENSDSAITQHNNFRTFFQALMLLFRSATGEAWHD 1657
Zfish 1658 IMLSCLGKKPCDILSDNPK---PECGSEFAYLYF-VSFIFLCSFLMLNLFVAVIMDNFEYLTRD- 1717
Zfish 1718 SSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPV 1782
Zfish 1783 ADDNTVHFNSTLMALIRTALDIKIAKG------GEGGVDKHQMDAELRKEMMA-IWPNLSQKNLD 1840
Zfish 1841 LLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKRTQALHDEQNRTPLMFQRLEPPSPSQDVGPGL 1905
Zfish 1906 TGLPDTQMHPANHLPVDERIPESQSWVTARAQEISQKAGNWSPEGQHPDDTTDNRRQSQTVEMRE 1970
Zfish 1971 MGRDGYSDTEQYLPMEGHGRAASMPRLPADNQQPRRKGRHRGENLTQPITDNSPMKRSASSLGHG 2035
Zfish 2036 RAGRSMRGEDYAMERVIPEEGHRHGHRHRDRSHRASERSLSRYTD 2080 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1aa | XP_021330047.1 | Ion_trans | 90..362 | CDD:306908 | 99/305 (32%) |
Ion_trans | 471..709 | CDD:306908 | 80/256 (31%) | ||
Ion_trans | 1141..1377 | CDD:306908 | 85/240 (35%) | ||
Ion_trans | 1467..1719 | CDD:306908 | 90/260 (35%) | ||
GPHH | 1720..1790 | CDD:318993 | 19/69 (28%) | ||
Ca_chan_IQ | 1792..1870 | CDD:312334 | 16/84 (19%) | ||
SOBP | <2151..2361 | CDD:317654 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 91/282 (32%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 13/132 (10%) | ||
Ion_trans | 835..1028 | CDD:278921 | 66/205 (32%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 57/414 (14%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 94/274 (34%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 13/55 (24%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 84/241 (35%) | ||
GPHH | 1880..1930 | CDD:293510 | 17/54 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |