Sequence 1: | NP_001139044.1 | Gene: | rnf150a / 559804 | ZFINID: | ZDB-GENE-060213-1 | Length: | 418 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017168354.1 | Gene: | Rnf150 / 330812 | MGIID: | 2443860 | Length: | 450 | Species: | Mus musculus |
Alignment Length: | 452 | Identity: | 306/452 - (67%) |
---|---|---|---|
Similarity: | 352/452 - (77%) | Gaps: | 36/452 - (7%) |
- Green bases have known domain annotations that are detailed below.
Zfish 1 MVVSLTQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYLDPVT----------SE 55
Zfish 56 IKTDRSECGRYGEHSPKRDARGFVFM---PQDRQACDGNTRFPLPHPSIPWIALIAKGNCTFREK 117
Zfish 118 IRHAAALNASAVVIFNVGSSNSNDTITMPHHGTGDVVAIMIPEPKGREIMALLEKNITVAMHISI 182
Zfish 183 GTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQ-------------RR 234
Zfish 235 LGDAAKKAISKLQVRTIRKGDKETDSDFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDH 299
Zfish 300 RTCPMCKMNILKALGIPPNTDCSDDAPPDYETS-SGQPSIAVTGASEVSVGESSLVLDQPLRITG 363
Zfish 364 LSHDYQEMNSVPADAESPHIASSEQHQPSMSNDPD---IMPMEI----AELQSDLEQEDVKS 418 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnf150a | NP_001139044.1 | PA_GRAIL_like | 45..180 | CDD:239037 | 93/147 (63%) |
UPF0233 | <194..>219 | CDD:299753 | 24/24 (100%) | ||
zf-RING_2 | 263..306 | CDD:290367 | 37/42 (88%) | ||
Rnf150 | XP_017168354.1 | PA_GRAIL_like | 45..192 | CDD:239037 | 93/147 (63%) |
RING-H2_GRAIL | 289..336 | CDD:319582 | 41/46 (89%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C193129814 | |
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I27927 |
eggNOG | 1 | 0.900 | - | - | E33208_3BHU7 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H33783 | |
Inparanoid | 1 | 1.050 | 592 | 1.000 | Inparanoid score | I5332 |
OMA | 1 | 1.010 | - | - | QHG50669 | |
OrthoDB | 1 | 1.010 | - | - | D1487241at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | oto52489 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107948 | |
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3602 |
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 1 | 1.500 | - | - | ||
18 | 18.300 |