DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf150a and H10E21.5

DIOPT Version :9

Sequence 1:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio
Sequence 2:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans


Alignment Length:396 Identity:120/396 - (30%)
Similarity:174/396 - (43%) Gaps:114/396 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish    24 VHLLCLD-----------FTVAEKEEWYTAFVNITYLDPVTSEIKTDRSE-----------CGRY 66
            |.|.|:|           .|.:.|:...:.|:. .|.|....::|.|.|:           |...
 Worm    30 VKLQCIDSEEVYGTLQTELTFSNKDGGGSTFLP-AYTDLCAPDMKFDDSQRVFFCKNCIQNCLSR 93

Zfish    67 GEHSPKRDARGFVFMPQDRQACDGNTRFPLPHPSIPWIALIAKGNCTFREKIRHAAALNASAVVI 131
            .|.:||.     :.:..|.:|         |:..:.|.. :.......||..:..          
 Worm    94 VETAPKN-----ILIVADVKA---------PNNRVSWFH-VQTPVSNIRESGKQC---------- 133

Zfish   132 FNVGSSNSNDTITMPHHGTGDVVAIMIPEPKGREIMALLEKNITVAMHISIGTRNLQKYVSRTSV 196
             ||.:||                |:..||....:.:                     :..|:|||
 Worm   134 -NVENSN----------------AMQSPEETSTDAL---------------------RSFSKTSV 160

Zfish   197 VFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQRRLGDAAKKAISKLQVRTIRKG-DKETDS 260
            :|||||||:||:||||||||||:||||||:|:||.||||.:||:||::::...||..| .:|..|
 Worm   161 LFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKALTRIPTMTITPGMTQELQS 225

Zfish   261 DFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCKMNILKALGIPPNTDCSDDA 325
            |   ||||::.|:..||:|:|||:|::|::|:||||.:||||||||.:|||..|.      .:|.
 Worm   226 D---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKHFGY------WNDI 281

Zfish   326 PPDYETSSGQPSIAVTGASEVSVGESSLVLDQPLRITGLSHDYQEMNSVPADAESPHIASSEQHQ 390
            ..|.:..:....||......:.:||                  ||..:..||..||...|.....
 Worm   282 RNDIQMPTNSRGIADDFTIRLELGE------------------QEHQAPSADVISPEANSDTSDS 328

Zfish   391 PSMSND 396
            ...|.|
 Worm   329 QGFSFD 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 22/145 (15%)
UPF0233 <194..>219 CDD:299753 21/24 (88%)
zf-RING_2 263..306 CDD:290367 24/42 (57%)
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 89/222 (40%)
RING-H2_GRAIL 226..273 CDD:319582 28/49 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161007950
Domainoid 1 1.000 82 1.000 Domainoid score I5903
eggNOG 1 0.900 - - E33208_3BHU7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm12529
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

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