DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB5IF and CG12107

DIOPT Version :10

Sequence 1:NP_955777.1 Gene:RAB5IF / 55969 HGNCID:15870 Length:143 Species:Homo sapiens
Sequence 2:NP_610314.1 Gene:CG12107 / 35712 FlyBaseID:FBgn0033209 Length:135 Species:Drosophila melanogaster


Alignment Length:56 Identity:31/56 - (55%)
Similarity:38/56 - (67%) Gaps:7/56 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    23 SVWSKVLRSDAA-------WEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGI 71
            |..|..||...|       ||||:||||||||.||:..:.||||||::||:||||:
  Fly    14 SAKSSTLREICARAITKSEWEDKEEFLDVIYWSRQVFGIFLGVIWGIVPLKGFLGL 69

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB5IFNP_955777.1 EMC6 44..>79 CDD:462067 18/28 (64%)
CG12107NP_610314.1 EMC6 42..118 CDD:462067 18/28 (64%)

Return to query results.
Submit another query.