DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSFL1C and p47

DIOPT Version :10

Sequence 1:XP_011527602.1 Gene:NSFL1C / 55968 HGNCID:15912 Length:375 Species:Homo sapiens
Sequence 2:NP_610284.1 Gene:p47 / 35674 FlyBaseID:FBgn0033179 Length:407 Species:Drosophila melanogaster


Alignment Length:416 Identity:157/416 - (37%)
Similarity:229/416 - (55%) Gaps:55/416 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     3 AERQEALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGD--EDIVTISQA--------- 56
            |.|.:.:.:|:.:||.:|:.|||:|.|..||::.||.:::....|  ..:.|:..|         
  Fly     2 AARGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPKPKPTS 66

Human    57 ---------------------TPSSVSRGTAP-REKSDNRVTSFRDLIHDQDEDEEEEEGQRSRF 99
                                 ..||.|...|| ..|:..:..:..|:..:...|::::     .|
  Fly    67 SSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDDDQQ-----AF 126

Human   100 YAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFA--GGGYRL 162
            |||||:|||||::|||::|:..|.:.|:.:.|:|.....|...|.| |..|.....|  |.|.||
  Fly   127 YAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQNIAEVGPSTSS-GSASGGSGGAVWGQGMRL 190

Human   163 GAAPEEESAYVAGEKRQHSSQDVH--VVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPA 225
            |....:.:|  .|.|:..::.:..  ||||||..|||:|.||||.|.||.|.:|||::.|||:|.
  Fly   191 GMTDNDHTA--VGTKKPAATIENKPVVVLKLWSQGFSIDGGELRHYDDPQNKEFLETVMRGEIPQ 253

Human   226 ELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGS-------TAPQVLSTSSPAQQAE 283
            ||  |..|..||:|:||||.||| |.:...:.|.|.||||||       .||.|....||.:.|.
  Fly   254 EL--LEMGRMVNVDVEDHRHEDF-KRQPVPQTFKGSGQKLGSPVANLVTEAPTVPVALSPGEAAN 315

Human   284 NEAKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTF 348
            .||.|..:|.::...|:|.:|||||||.||..:||.||.:||||.||..|||..:.::|||:::|
  Fly   316 QEASARDAINLNSEAPSTTLQIRLADGSRLAAQFNLSHTVSDIRRFIQTARPQYSTSNFILVSSF 380

Human   349 PNKELADESQTLKEANLLNAVIVQRL 374
            |.:||:|::.|:::|.|.||.::|||
  Fly   381 PTRELSDDNSTIEKAGLKNAALMQRL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSFL1CXP_011527602.1 UBA_p47 7..45 CDD:270533 13/37 (35%)
SEP 183..275 CDD:197786 51/100 (51%)
UBX_UBXN2C 294..375 CDD:340682 40/81 (49%)
p47NP_610284.1 UBA_ceTYDP2_like 6..42 CDD:270612 13/35 (37%)
SEP 211..300 CDD:197786 48/91 (53%)
UBX_UBXN2 334..405 CDD:340468 35/70 (50%)

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