Sequence 1: | NP_061198.2 | Gene: | MYO5C / 55930 | HGNCID: | 7604 | Length: | 1742 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 1511 | Identity: | 449/1511 - (29%) |
---|---|---|---|
Similarity: | 731/1511 - (48%) | Gaps: | 224/1511 - (14%) |
- Green bases have known domain annotations that are detailed below.
Human 7 YTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVNPESLPPLRNPDILVGEND 71
Human 72 LTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPH 136
Human 137 IFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKS-------GSNAHVEDKV 194
Human 195 LASNPITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVVFQSENERNYHI 259
Human 260 FYQLCASAQQSEFKHLKLGSAEEFNYTRMG-GNTVIEGVNDRAEMVETQKTFTLLGFKEDFQMDV 323
Human 324 FKILAAILHLGNVQITAVGNERSSVSEDDSHLKVFCELLGLESGRVAQWLCNRKIVTSSETVVKP 388
Human 389 MTRPQAVNARDALAKKIYAHLFDFIVERINQALQFSGKQHTFIGVLDIYGFETFDVNSFEQFCIN 453
Human 454 YANEKLQQQFNMHVFKLEQEEYMKEDIPWTLIDF-YDNQPVIDLIEAKMGILELLDEECLLPHGT 517
Human 518 DENWLQKLYNNFVNRNPLFEKPR-----MSNTSFVIQHFADKVEYKCEGFLEKNRDTVYDMLVEI 577
Human 578 LRASKFHLCANFFQENPTPPSPFGSMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNAT 642
Human 643 TPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQE 707
Human 708 LSFSDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMVQKHMRGWLQ 772
Human 773 RKKF--LRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIIIQKHCRGYL------------- 822
Human 823 VRSLYQLIR----MATITMQAYSRGFL--ARRRYRKMLE-------EHKAVILQKYARAWLARRR 874
Human 875 FQSIRRFVLNIQLTYRVQRLQKKLEDQNKENHGLVEKLTSLAALR--------------AGDVEK 925
Human 926 IQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEKTEELKEKM 990
Human 991 DNLTK----------QLFDDVQKEERQRMLLEKS-----FELK-TQ----DYEKQIQSLKEEIKA 1035
Human 1036 LKDEKMQLQHLVEGEHVTSDGLKAEVARLSKQVK----TISEFEKEIELLQAQKIDVEKHVQSQK 1096
Human 1097 REMREKMSEITKQLLE-----SYDIEDVRSR---LSV--EDLEHLNEDGELWFAYEGLKK----- 1146
Human 1147 ----ATRV-----LESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHEVT 1202
Human 1203 RLTSENMMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELSNQLHRSQEEEGTQRKALEAQ 1267
Human 1268 NEIHTKEKEKLIDKIQEMQEASDHLKKQFETESEVKCNFRQEASRLTLE---------------N 1317
Human 1318 RDLE-----------------EELDMK----DRVIKKLQDQVKTLSKTIGKANDVHSSSGPKE-- 1359
Human 1360 ---YLGMLQYKREDEA 1372 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MYO5C | NP_061198.2 | Myosin_N | 12..48 | CDD:280832 | 11/35 (31%) |
MYSc | 62..752 | CDD:214580 | 270/703 (38%) | ||
MYSc_Myo5 | 81..741 | CDD:276831 | 261/673 (39%) | ||
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 | 632..654 | 13/21 (62%) | |||
IQ | 810..828 | CDD:197470 | 6/30 (20%) | ||
COG1340 | 890..1150 | CDD:224259 | 73/316 (23%) | ||
P-loop_NTPase | <910..>1163 | CDD:304359 | 73/314 (23%) | ||
GBP_C | <927..1030 | CDD:303769 | 29/122 (24%) | ||
coiled coil | 997..1010 | CDD:293879 | 4/12 (33%) | ||
coiled coil | 1019..1030 | CDD:293879 | 4/14 (29%) | ||
Rab5-bind | 1020..1345 | CDD:286404 | 85/392 (22%) | ||
DUF3585 | 1160..1326 | CDD:304905 | 40/197 (20%) | ||
Myo5c_CBD | 1369..1736 | CDD:271260 | 2/4 (50%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 12/41 (29%) |
MYSc | 81..777 | CDD:214580 | 270/704 (38%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 261/673 (39%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 143/659 (22%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | |||
ATP-synt_B | <1671..1771 | CDD:304375 | |||
TMPIT | 1739..>1825 | CDD:285135 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |