DRSC/TRiP Functional Genomics Resources

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Protein Alignment si:dkey-28d5.12 and lectin-22C

DIOPT Version :9

Sequence 1:XP_017212679.1 Gene:si:dkey-28d5.12 / 559125 ZFINID:ZDB-GENE-060503-541 Length:377 Species:Danio rerio
Sequence 2:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster


Alignment Length:121 Identity:37/121 - (30%)
Similarity:57/121 - (47%) Gaps:17/121 - (14%)


- Green bases have known domain annotations that are detailed below.


Zfish    28 ECVQRQYYFINE--GKYWIEAQRYCREKYTDLATVDNMNDM--IELNKSVEVNYEAVWIGL---- 84
            |.:..:||:|.:  .|.|..|.:.||.....||.:.:..|:  |:.|...:.:|   |:|:    
  Fly   140 EQIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIKDEADLAAIKANLKEDTHY---WLGINDLD 201

Zfish    85 -QGTNVSNWHWSSGDPVLFLNWASGQPYSGD--NCTVIKNGQWSVGACTATWTFIC 137
             :|..:|   ..:|....||.||||:|...|  ||..:.||:.....|..|:.|||
  Fly   202 HEGKFLS---MPTGKQTTFLKWASGRPSQLDTLNCVFLYNGEMYDYPCHYTFRFIC 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
si:dkey-28d5.12XP_017212679.1 None
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 36/115 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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