Sequence 1: | NP_008835.5 | Gene: | PRKDC / 5591 | HGNCID: | 9413 | Length: | 4128 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012600.1 | Gene: | TOR1 / 853529 | SGDID: | S000003827 | Length: | 2470 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 2975 | Identity: | 589/2975 - (19%) |
---|---|---|---|
Similarity: | 1034/2975 - (34%) | Gaps: | 946/2975 - (31%) |
- Green bases have known domain annotations that are detailed below.
Human 1568 NTELLKNLDLAVLELMQSS--VDNTKMVSAVLNG-------------MLDQSFRERANQKHQGLK 1617
Human 1618 LAT-------TILQHWKKCDSWWAKDSPLETKMAVLALLAK-------ILQIDSSVSFNTSHGSF 1668
Human 1669 PEVFTTYISLLADTKLDLHLKGQAVTLLPFFTSLTGGSLEELR---RVLEQLIVAHFPMQSREFP 1730
Human 1731 PGTPRFNNYVDC-MKKFLDALELSQSPMLLELMTEVLCREQQHVMEELFQSSFRRIARRGSCVTQ 1794
Human 1795 VGLLES----VYEMFRKDDPRLSFTRQSFVDRSLLTLLWHCSLDALREFFSTIVVDA-IDVLKSR 1854
Human 1855 FTKLNESTFDTQITK----------KMGY-YKILDVMYSRL--PKDDVHAKESKINQVFHGSCIT 1906
Human 1907 EGNELTKTLIKLCYDAFTENMAGENQLLE--RRRLYHCAAYNCAISVICCVFNELKFYQGFLFSE 1969
Human 1970 KPEKNLLIFENLIDLKRRYNFPVEVEVPMERKKK---YIEIRKEAREAANGDSDGPSYMSSLSYL 2031
Human 2032 ADSTLSEEMSQFDFSTGVQSYSY-----SSQDPRPATGRFRRREQRDPTVHDDVLELEMDELNRH 2091
Human 2092 ECMAPLTALVKHMHRSLGPPQGEEDSVPRDLPSWMKFLHGKL-GNPIV----PLNIRLFLAKLVI 2151
Human 2152 NTEEVFRPYAKHWLSP-LLQLAASENNGGEGI---------------HYMVVEIVATI-LSWTGL 2199
Human 2200 ATP----------------------TGVPKDEVLANRLLNFLMKHVFHPKRAVFRHNLEIIKTLV 2242
Human 2243 ECWKDCLSIP--YRLIFEKFSGKDPNSKDNSVGIQLLGIVMANDLPPYDPQCGIQSSEYFQALVN 2305
Human 2306 NMSFVRYKEVYAAAAEVLGLILRYVMERKNILEESLCELVAKQLKQHQNTMEDKFIVCLNKVTKS 2370
Human 2371 FPPLADRFMNAVFFLLPKFHGVLKTLC---------LEVVLCRVEGMTELYFQLKSKDFVQVMRH 2426
Human 2427 RDDERQKVCLDIIYKMMPKLKP---------VELRELLNPVVEFV-SHPSTTCREQMYNI--LMW 2479
Human 2480 IHDNYRDPESE----TD-NDSQEIFKLAKDVLIQGLIDENPGLQLIIRNFWSHETRLPSNTLDRL 2539
Human 2540 L---ALNSLYSPKIE--VH-FLSLATNFLLEMTSMSPDYPNPM--FEHPLSECEFQEYT------ 2590
Human 2591 -------IDSDWRFRSTVLTPMFVETQASQGTLQ----------TRTQEGSLSARWPVAGQIRAT 2638
Human 2639 QQQHDFTLT---QTADGRSSFDWLTGSSTDPLVDHTSPSSDS---------LLFAHKRSERLQRA 2691
Human 2692 PLKSVGPDFGKKRLGLPGD--EVDNKVKGAAGRTDLLRLRRRFMRDQ------EKLSLMYARKGV 2748
Human 2749 AEQKREKEIKSELKMKQDAQVVLYRSYRHGDLPDIQIKHSSLITPLQAVAQRDPIIAKQLFSSLF 2813
Human 2814 SGILK-EMDKFKTLSEKNNITQKLLQDFNRFLNTTFSFFPPFVSCIQDISCQHAALLSLDPAAVS 2877
Human 2878 AGC--LASLQQPVGIRLL---------------EEALLRLLPAEL--PAKRVRGKARLPPDV--- 2920
Human 2921 -LRWVE--------LAKLYRSIGEYDVLRGIFTSEIGTKQITQSALLAEARSDYSEAAKQYDEAL 2976
Human 2977 NKQDWVDG-------------EPTEAEK-DFWELASLDCYNH---------------------LA 3006
Human 3007 EWKSLEYCSTASIDSENPPDLNKIWSEPFYQETYLPYMIRSKLKLLLQGEA---------DQSLL 3062
Human 3063 TFIDKAMHGELQKAILELHYSQELSLLYLLQDDVDRAKYYIQNGIQSFMQNYSSIDVLLHQSRLT 3127
Human 3128 KLQSV----QALTEIQEFISFISKQGNLSSQVPLKRLLNTWTNRYPDAKMDPMNIWDDIITNRCF 3188
Human 3189 FLSKIEEKLTPLPEDNSMNVDQDGDPSDRMEVQEQEEDISSLIRSCKFSMKMKMIDSARKQNNFS 3253
Human 3254 LAMKLLKELHKESKTRDDWLVSWVQS-----YCRLSHCRSRSQGCSEQVLTVLKTVSLLDENNVS 3313
Human 3314 SYLSKNILAFRDQNILLGTTYRIIANALSSEPACLAEIEEDKARRILELSGSSS----EDSEKVI 3374
Human 3375 AGLYQRAFQHLSEAVQAAEEEAQPPSWSCGPAAGVIDAYMTLADFCDQQLRKEEENASVIDSAEL 3439
Human 3440 QAYPALVVEKMLKALK--------LNSNEARL---------------KFPRLLQIIERYP----- 3476
Human 3477 --------------EETLSLMT--------KEISSV-----PCWQFISWISHMVALLDK----DQ 3510
Human 3511 AV--AVQHSVEEITDNYPQAIVYPFIISSESYSFKDTSTGHKNKEFVARIKSKLDQGGVIQD--- 3570
Human 3571 ----FINALDQLSNPELL-------------FKDWSNDVRAELAKTPVNKKNIEKMY---ERMYA 3615
Human 3616 ALGDPKAPGLGAFRRKFIQTFGK-EFDKHFGKGGSKLLRMKLSDFNDITNMLLLKMNKDSKPPGN 3679
Human 3680 LKECSPWMSDFKVEFLRN--------------------------ELEIPGQYDGRGKPLPEYHVR 3718
Human 3719 IAGFDERVTVMASLRRPKRIIIRGHDEREHPFLVKGGEDLRQDQRVEQLFQVMNGILAQDSACSQ 3783
Human 3784 RALQLRTYSVVPMTSRLGLIEWLENTVTLKDLLLNTMSQEEKAAYLSDPRAPPCEYKDWLTKMSG 3848
Human 3849 KHDVGAYMLMYKGANRTETVTSFRKRESKVPA-------DLLKRAFVRMSTSPEAFLALRSHFAS 3906
Human 3907 SHALICISHWILGIGDRHLNNFMVAMETGGVIGIDFGHAFGSATQFLPVPELMPFRLTRQFINLM 3971
Human 3972 LPMKETGLMYSIMV---HALRAFRSDPGLLTNTMDVFVKEPSFDW-------KNFEQ-------- 4018
Human 4019 ---KMLKKGGSWIQE---INVAEKNWYPRQKICYAKRKLAGANPAVITCDELLLGHEKAPAFRDY 4077
Human 4078 VAVARGSKDHNIRAQEPESGLSEETQVKCLMDQATDPNILGRTWEGWEPW 4127 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PRKDC | NP_008835.5 | HEAT 1 | 288..323 | ||
HEAT 2 | 1004..1040 | ||||
Interaction with C1D. /evidence=ECO:0000269|PubMed:9679063 | 1503..1538 | ||||
Leucine-zipper | 1503..1538 | ||||
TPR 1 | 1723..1756 | 7/33 (21%) | |||
NUC194 | 1816..2202 | CDD:400469 | 82/431 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2050..2073 | 3/27 (11%) | |||
KIP-binding | 2436..3212 | 173/923 (19%) | |||
FAT | 3023..3470 | CDD:396714 | 85/491 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 3200..3222 | 1/21 (5%) | |||
PIKKc_DNA-PK | 3719..4015 | CDD:270716 | 94/312 (30%) | ||
FATC | 4097..4128 | CDD:396715 | 11/31 (35%) | ||
TOR1 | NP_012600.1 | TEL1 | 279..2470 | CDD:227365 | 523/2653 (20%) |
HEAT repeat | 588..620 | CDD:293787 | 3/31 (10%) | ||
HEAT repeat | 632..658 | CDD:293787 | 7/28 (25%) | ||
HEAT repeat | 668..698 | CDD:293787 | 8/36 (22%) | ||
HEAT repeat | 706..736 | CDD:293787 | 4/31 (13%) | ||
HEAT repeat | 749..778 | CDD:293787 | 7/31 (23%) | ||
HEAT_EZ | 771..820 | CDD:290247 | 9/54 (17%) | ||
HEAT repeat | 792..827 | CDD:293787 | 4/35 (11%) | ||
DUF3385 | 827..986 | CDD:288698 | 34/168 (20%) | ||
Rapamycin_bind | 1952..2049 | CDD:285924 | 31/133 (23%) | ||
PIKKc_TOR | 2090..2366 | CDD:270713 | 93/303 (31%) | ||
FATC | 2439..2470 | CDD:280430 | 11/43 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5032 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |