DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MESP1 and CG33557

DIOPT Version :9

Sequence 1:NP_061140.1 Gene:MESP1 / 55897 HGNCID:29658 Length:268 Species:Homo sapiens
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:133 Identity:39/133 - (29%)
Similarity:53/133 - (39%) Gaps:17/133 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    38 SSPDSWGSTPA----DSPVASPARPGTLRDPRAPSVGRRGARSSRLGSGQRQSASEREKLRMRTL 98
            ||..:.||..|    ||.:...|.||          |:....:.| ....||..:.||:.|...:
  Fly    24 SSGSASGSGAAADSEDSQIGQEANPG----------GQENQGNHR-RRPPRQKINARERYRTFNV 77

Human    99 ARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSAVLGLSEESLQRRCRQRGDAGSPRGC 163
            ..|...||..:|  ..|..:.|:|||.:|||..||.|||:.|....|.......:....|..|..
  Fly    78 NSAYEALRNLIP--TEPMNRKLSKIEIIRLASSYITHLSSTLETGTECQPCLLHKYESEGITRRI 140

Human   164 PLC 166
            .:|
  Fly   141 SIC 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESP1NP_061140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..93 16/58 (28%)
bHLH_TS_Mesp 83..147 CDD:381508 24/63 (38%)
CPLCP 163..167 1/4 (25%)
2 X 2 AA tandem repeats of G-Q 182..185
CG33557NP_001014730.1 HLH 67..119 CDD:197674 21/53 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.