DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKCI and Prkci

DIOPT Version :10

Sequence 1:NP_002731.4 Gene:PRKCI / 5584 HGNCID:9404 Length:596 Species:Homo sapiens
Sequence 2:NP_114448.1 Gene:Prkci / 84006 RGDID:620961 Length:596 Species:Rattus norvegicus


Alignment Length:596 Identity:588/596 - (98%)
Similarity:590/596 - (98%) Gaps:0/596 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPTQRDSSTMSHTVAGGGSGDHSHQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQL 65
            |||||||||||||||.||.||||||||||||||||||||||||||||||||:||||||||||||.
  Rat     1 MPTQRDSSTMSHTVACGGGGDHSHQVRVKAYYRGDIMITHFEPSISFEGLCSEVRDMCSFDNEQP 65

Human    66 FTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPCVPERPGMPCPGEDKSIYRRGAR 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 FTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPCVPERPGMPCPGEDKSIYRRGAR 130

Human   131 RWRKLYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTIECGRHSL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 RWRKLYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTIECGRHSL 195

Human   196 PQEPVMPMDQSSMHSDHAQTVIPYNPSSHESLDQVGEEKEAMNTRESGKASSSLGLQDFDLLRVI 260
            |.||:|||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 PPEPMMPMDQSSMHPDHTQTVIPYNPSSHESLDQVGEEKEAMNTRESGKASSSLGLQDFDLLRVI 260

Human   261 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 325

Human   326 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 390

Human   391 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 455

Human   456 VGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 VGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 520

Human   521 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYI 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   521 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYI 585

Human   586 NPLLMSAEECV 596
            |||||||||||
  Rat   586 NPLLMSAEECV 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCINP_002731.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 19/21 (90%)
Regulatory domain 2..253 242/250 (97%)
Required for interaction with RAB2 2..28 23/25 (92%)
PB1_aPKC 26..108 CDD:99725 79/81 (98%)
Interaction with PARD6A 72..91 18/18 (100%)
Pseudosubstrate. /evidence=ECO:0000250 125..134 8/8 (100%)
C1_aPKC 139..193 CDD:410344 53/53 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..246 25/25 (100%)
STKc_aPKC_iota 233..596 CDD:270769 362/362 (100%)
PrkciNP_114448.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 17/19 (89%)
Regulatory domain. /evidence=ECO:0000250 2..253 242/250 (97%)
Required for interaction with RAB2. /evidence=ECO:0000250 2..28 23/25 (92%)
PB1_aPKC 26..108 CDD:99725 79/81 (98%)
Interaction with PARD6A. /evidence=ECO:0000250 72..91 18/18 (100%)
Pseudosubstrate. /evidence=ECO:0000250 125..134 8/8 (100%)
C1_aPKC 139..193 CDD:410344 53/53 (100%)
STKc_aPKC_iota 233..596 CDD:270769 362/362 (100%)

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