DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKCI and aPKC

DIOPT Version :10

Sequence 1:NP_002731.4 Gene:PRKCI / 5584 HGNCID:9404 Length:596 Species:Homo sapiens
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:626 Identity:376/626 - (60%)
Similarity:438/626 - (69%) Gaps:96/626 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    13 TVAGGGSG-------------DHSHQVRVKAYYRGDIMITHFE--------PSISFEGLCNEVRD 56
            ::|||..|             .|.||    .|:...|   |:|        |::.. |:....:.
  Fly   387 SIAGGSIGGRSSVLGTIHNGHGHHHQ----QYHHECI---HYERLPIPVPIPTVPM-GVAPSSQQ 443

Human    57 MCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPCVPERPGMPCPGED 121
            |   ...||               .|:.|:|.|:..            |||.||:.||:.|.|||
  Fly   444 M---SQHQL---------------QSEEEIEPAYAT------------VFPNVPQAPGLSCDGED 478

Human   122 KSIYRRGARRWRKLYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLV 186
            :||||||||||||||..|||.||||||||||.||.|.||||||||||:|||.|||||||||||||
  Fly   479 RSIYRRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCKLLVHKKCHKLV 543

Human   187 TIECGRHSLP------QE-------PVMPMDQSSMHS--------DHAQTVIPYNPSSHESLDQV 230
            ...|.....|      :|       |:.|:...:|..        |||..|.|  |...:.|:..
  Fly   544 QKHCTDQPEPLVKERAEESSDPIPVPLPPLPYEAMSGGAEACETHDHAHIVAP--PPPEDPLEPG 606

Human   231 GEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED 295
            .:.:.::|              ||:|:||||||||||||:|.|::|.|||||||:||.||.||||
  Fly   607 TQRQYSLN--------------DFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDED 657

Human   296 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 360
            ||||||||||||.||||||||||||||||.||||||||:|.|||||:||||||:|||||||||:|
  Fly   658 IDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAA 722

Human   361 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 425
            |||||||:|||:|||||||||||||||.|||||||||||||||:|||||||||||||||||||||
  Fly   723 EISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEIL 787

Human   426 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 490
            |||||||||||||||||::||:|||||||:.|:|:|||||||||||||||||.|||||||||:||
  Fly   788 RGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAA 852

Human   491 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQ 555
            ||||.||||:|.:|||||.::.|.||..||||:|:||:::|:|||.|||||.:..:..|.||..:
  Fly   853 SVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPE 917

Human   556 FTNEPVQLTPDDDDIVRKIDQSEFEGFEYINPLLMSAEECV 596
            ||.|.||||||||.::..|||||||||||:||||||.|:||
  Fly   918 FTGEAVQLTPDDDHVIDNIDQSEFEGFEYVNPLLMSLEDCV 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCINP_002731.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/22 (18%)
Regulatory domain 2..253 101/281 (36%)
Required for interaction with RAB2 2..28 7/27 (26%)
PB1_aPKC 26..108 CDD:99725 15/89 (17%)
Interaction with PARD6A 72..91 4/18 (22%)
Pseudosubstrate. /evidence=ECO:0000250 125..134 8/8 (100%)
C1_aPKC 139..193 CDD:410344 43/53 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..246 3/25 (12%)
STKc_aPKC_iota 233..596 CDD:270769 274/362 (76%)
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 43/53 (81%)
STKc_aPKC 620..947 CDD:270740 262/326 (80%)

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