DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCI and pck2

DIOPT Version :10

Sequence 1:NP_002731.4 Gene:PRKCI / 5584 HGNCID:9404 Length:596 Species:Homo sapiens
Sequence 2:NP_595950.1 Gene:pck2 / 2539649 PomBaseID:SPBC12D12.04C Length:1016 Species:Schizosaccharomyces pombe


Alignment Length:634 Identity:199/634 - (31%)
Similarity:292/634 - (46%) Gaps:184/634 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   121 DKSIYRRGARRWRK--LYCANGHTFQAKRFNRRAHCAICTDRIWGLGRQGYKCINCKLLVHKKCH 183
            |..:.|:||.|.||  ::...||.|...:|.:...||:|.:.:  ....|.:||:|....||||:
pombe   384 DAGLGRQGAIRQRKESVHEVYGHKFLQHQFYQIMRCALCGEFL--KNAAGMQCIDCHYTCHKKCY 446

Human   184 -KLVT-----------------------------------------------------IECG--- 191
             |:||                                                     .|||   
pombe   447 PKVVTKCISKSSDSASSEYEKINHRIPHHFESHTNIGANWCCHCGYILPLGRKTARKCTECGITA 511

Human   192 ----RHSLPQEPVMPMD----------------------QSSMHSDHAQTVIPYNPSSHESLD-- 228
                .|.:|....|.|:                      :||.|..|.......:.|.|:..|  
pombe   512 HAQCVHLVPDFCGMSMEMANRVISEIRTTKIYKAQQHKQKSSHHKHHHHKKSKSSSSKHKENDKA 576

Human   229 ------------------------------------------------------QVGEEK----- 234
                                                                  ||.|:|     
pombe   577 SVSITTTTTPSITPADPVPTSPKPLAIEPVKRKPVHAGNLEVTSVSDNKLGATVQVVEQKVDDKA 641

Human   235 EAMNTRESGKA----------------------SSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTD 277
            :|:....|..|                      :..:||:||..|.|:|:|::.||:|..||...
pombe   642 DALTKPPSLDAVKEPIPVPSVETSVVAQDLTHKAKRIGLEDFTFLSVLGKGNFGKVMLAELKSEK 706

Human   278 RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGGDL 340
            ::||:||:|||.:.::::::..::||.||..|:  .|||||.||||||||:|::||:::|:||||
pombe   707 QLYAIKVLKKEFILENDEVESTKSEKRVFLVANRERHPFLVNLHSCFQTETRIYFVMDFVSGGDL 771

Human   341 MFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 405
            |.|:| |.:.....|:||:||:.|||.|.|:.|||||||||||:||..:||:|:.|||:|||.:.
pombe   772 MLHIQ-QEQFSRRRAQFYAAEVCLALKYFHDNGIIYRDLKLDNILLSPDGHVKVADYGLCKEDMW 835

Human   406 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 470
            ..:||:||||||.::|||||..:.|..||||||.|||:::|:.|:|||         ....|:.:
pombe   836 HDNTTATFCGTPEFMAPEILLEQQYTRSVDWWAFGVLIYQMLLGQSPF---------RGEDEEEI 891

Human   471 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQV 535
            |..||..:...|..:...:.|:|:..|.:|||:|||..|... .|:..||||.|::||.:..|:.
pombe   892 FDAILSDEPLYPIHMPRDSVSILQQLLTRDPKKRLGSGPNDA-EDVMTHPFFSNINWDDIYHKRT 955

Human   536 VPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEY 584
            .||:.|:::.......||.:||.|...||| .:.|:.|..|..||||.|
pombe   956 QPPYIPSLNSPTDTKYFDEEFTRELPVLTP-VNSILTKEMQQHFEGFSY 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCINP_002731.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Regulatory domain 2..253 48/299 (16%)
Required for interaction with RAB2 2..28
PB1_aPKC 26..108 CDD:99725
Interaction with PARD6A 72..91
Pseudosubstrate. /evidence=ECO:0000250 125..134 4/8 (50%)
C1_aPKC 139..193 CDD:410344 21/114 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..246 10/108 (9%)
STKc_aPKC_iota 233..596 CDD:270769 157/381 (41%)
pck2NP_595950.1 HR1_PKC-like_1_fungi 2..73 CDD:212011
HR1_PKC-like_2_fungi 115..186 CDD:212010
C2_fungal_Pkc1p 213..320 CDD:176071
C1_ScPKC1-like_rpt1 404..454 CDD:410372 18/51 (35%)
C1_ScPKC1-like_rpt2 470..528 CDD:410373 6/57 (11%)
STKc_PKC 688..1003 CDD:270722 147/326 (45%)
Blue background indicates that the domain is not in the aligned region.

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