DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPAP and Sas-4

DIOPT Version :10

Sequence 1:NP_060921.3 Gene:CPAP / 55835 HGNCID:17272 Length:1338 Species:Homo sapiens
Sequence 2:NP_649701.2 Gene:Sas-4 / 40859 FlyBaseID:FBgn0011020 Length:901 Species:Drosophila melanogaster


Alignment Length:1145 Identity:275/1145 - (24%)
Similarity:447/1145 - (39%) Gaps:337/1145 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   281 EENRNHPTGESILCWEKVTEQI------QEANDKNLQKHDDSSEV-ANIEERPIKAAIGERKQTF 338
            :|....|.|.. |..|.:.:::      |:...:.||:...:..| ..:|:|.:...:|...|..
  Fly     2 QEAGESPVGMP-LSQEAIAQRLAALSRWQDEQKRLLQERQSNHRVLLGLEQRNMYKMLGLLHQET 65

Human   339 EDY----LEEQIQLEEQELKQKQL----KEAEGPL----PIKAKPKQPFLKRGEGLA-------- 383
            |.:    |||..  ||..::..:|    .|.|..:    |..||||:|||:|||||.        
  Fly    66 ESHENSVLEEWD--EEHSIQMPRLAADPDEHEPEISMADPQPAKPKRPFLRRGEGLKQRFKINPD 128

Human   384 ----------RFTNAKSKFQKGKESK-LVTNQSTSEDQP-----------LFKMDRQQLQRKTAL 426
                      :|.||..:|:..:..| ::..|..|...|           |..::.|:.|:  .|
  Fly   129 QLRLENLPRYKFANAHPQFRTPQMKKGILKKQVKSPPNPAPPPAPKPSAQLDDLNEQRFQQ--ML 191

Human   427 KNKELCADNPILKKDSKARTKSGSVTLSQKPKMLKCSNRKSLSPSGLKIQTGKKCDGQFRDQIKF 491
            ..|..|:..|.||....:.|.:.|.:    |::                        :|.:|...
  Fly   192 IGKNACSSTPDLKSSYASSTTASSTS----PRV------------------------RFVEQKSR 228

Human   492 ENKVTSNNKENVTECPKPCDTGCTGWNK---TQGKDRLPLSTGPASRLAAKSPIRETMKESESSL 553
            ..:.|..:.|..:|. .|....|  |.|   ||       |..||......:.||   .|.:|::
  Fly   229 AGQTTHADDEASSEA-SPMTGVC--WAKVLDTQ-------SIKPAQIQRRSAQIR---VEDDSNV 280

Human   554 DVSLQKKLETWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICKGHRMSSTPV 618
            .:                      |..|||.|.|.:...|||.:...:.|..             
  Fly   281 SI----------------------FELLEQKATEGNIDMNSSCIRTFMARKD------------- 310

Human   619 KAVPQKTNPADPISHCNRSEDLDHTAREKESECEVAPKQLHSLSSADELREQPCKIRKAVQKSTS 683
                |:...||         |.||.         |..:|:.      ::|.||     .|.:...
  Fly   311 ----QRRRVAD---------DSDHI---------VVTQQVR------QMRLQP-----QVDQMLV 342

Human   684 ENQTEWNARDDEGVPNSDSSTDSEEQLDVTIKP----STEDRERGISSREDSPQVCDDKGPFKDT 744
            :...|.:..|.|  |:||.:        :|:.|    :|:.|.|                 |.|:
  Fly   343 QELQEGDEEDTE--PSSDQT--------LTMTPIQVGNTKVRVR-----------------FSDS 380

Human   745 RTQEDKRRDVDLDLSDKDYSSDESIMESIKHKVSEPSRSSSLSLSKMDFDDERTWTDLEENLCNH 809
            .             ...:||...|:.:....::.|..:|:             .:..||:     
  Fly   381 N-------------DTHEYSDATSLNDGSNIQLFEQFKSA-------------LFQALEQ----- 414

Human   810 DVVLGNESTYGTPQTCYPNNEIGILDKTIKRKIAPVKRGEDLSKSRRSRSPPTSELMMKFFPSLK 874
                                         |:|.:|         |:.|..|.|.:|..|      
  Fly   415 -----------------------------KKKSSP---------SKESDEPITKDLQEK------ 435

Human   875 PKPKSDSHLGNELKLNISQDQPPGDNARSQVLREKIIELETEIEKFKAENASLAKLRIERESALE 939
                                        :.::|.::.||||||..||.:||.|.:||.:.|....
  Fly   436 ----------------------------ANLVRTRLEELETEIATFKEQNAQLLRLRQQHELEKA 472

Human   940 KLRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIA 1004
            |..::..:..::...|..:.|.:..:|..|:::||:.||:.....::..:.||::||..|||::.
  Fly   473 KCTQDHMEAMERVHDEKIQAEIYLHDERMKIEEERRKFEQQMRLQKSNANSKEKKEIAALKQEVE 537

Human  1005 DLREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVM--ERFRLDAWKRAEAIESSLEVEK 1067
            .|:..||:||....|..:|||:|::...:|..:.|:||:::  |..||:    .|.::...|...
  Fly   538 GLQLQLKQKEQAHVSAQARLRAQLRASEKEQRNYRDEIELLRKENKRLE----QELVKIGRENNS 598

Human  1068 K--DKLANTSVRFQNSQISSGTQVEKYKKNYLPMQGNPPRRSKSAPPRDLGNLDKGQAAS----- 1125
            |  .::.....|.....:.|.|..:...:|....|.......|.|..|:..|..:...::     
  Fly   599 KMLQEINRNIARLAPKVLPSATMSDILDENGRRTQSLDGTAGKPAKQREAQNRRQSSGSAQVRSR 663

Human  1126 ----PREPLEPLNFPDPEYKEEE--EDQDIQGEISHP-------------DGKVEKVYKNGCRVI 1171
                .|....|... |..|....  |.:::|..::.|             |.|.|....:|.:.|
  Fly   664 SRSLSRNKKTPYAL-DESYASSSSVESEEVQPPVTAPKAATPPPAANSSSDFKREITNADGSKDI 727

Human  1172 LFPNGTRKEVSADGKTITVTFFNGDVKQV-MPDQRVIYYYAAAQTTHTTYPEGLEVLHFSSGQIE 1235
            .:|||..|::||||..:.:.:||.|:|:. :.:..|.||||...|.||:|.:|||:|.|.:||.|
  Fly   728 WYPNGNLKKISADGMNLRMLYFNKDIKETNIREGTVKYYYAETNTWHTSYLDGLEILEFPNGQTE 792

Human  1236 KHYPDGRKEITFPDQTVKNLFP---DGQEESIFPDGTIVRVQRDGNKLIEFNNGQRELHTAQFKR 1297
            ....||..||.||:.::|.:.|   :..||..:.|||.:...|:|:|::...|||:|:||...||
  Fly   793 HRRKDGTVEIHFPNNSIKIVDPSDTEKLEEWRYADGTHLVQLRNGDKILNLPNGQKEIHTKLNKR 857

Human  1298 REYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDTE 1337
            |||||||||.||.:|.|||:|.:||:|:|||:|.::|||:
  Fly   858 REYPDGTVKLVYPDGSQETRYSNGRVRLKDKDGKLIMDTD 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPAPNP_060921.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..211
Alpha/beta-tubulin binding. /evidence=ECO:0000269|PubMed:19131341 319..394 31/105 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..414 8/39 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..479 6/42 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..551 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..789 30/181 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 845..865 4/19 (21%)
SMC_N <886..1148 CDD:481474 65/276 (24%)
Interaction with STIL. /evidence=ECO:0000269|PubMed:22020124, ECO:0000269|PubMed:25385835 895..1338 151/475 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1096..1153 11/67 (16%)
Tcp10_C 1152..1180 CDD:462118 9/40 (23%)
Tcp10_C 1225..1253 CDD:462118 12/27 (44%)
Tcp10_C 1261..1289 CDD:462118 11/27 (41%)
Tcp10_C 1296..1325 CDD:462118 20/28 (71%)
Sas-4NP_649701.2 Smc <435..>654 CDD:440809 61/256 (24%)
YwqK 731..900 CDD:442097 78/167 (47%)
Tcp10_C 821..850 CDD:462118 11/28 (39%)
Tcp10_C 856..884 CDD:462118 20/27 (74%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.