DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPAP and ttr-14

DIOPT Version :10

Sequence 1:NP_060921.3 Gene:CPAP / 55835 HGNCID:17272 Length:1338 Species:Homo sapiens
Sequence 2:NP_509801.1 Gene:ttr-14 / 181272 WormBaseID:WBGene00011460 Length:406 Species:Caenorhabditis elegans


Alignment Length:214 Identity:53/214 - (24%)
Similarity:102/214 - (47%) Gaps:30/214 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   876 KPKSDSHLGNELKLNISQDQPPGDNARSQVLREKIIELETEIEKFKAENASLAKLRIERESALEK 940
            |...:.|:.::....:|.::...:..|.: |.|:...|: ||.:.:.|:     ||:|....:|:
 Worm   211 KDNEEHHVDHQEHHEVSDEERRIEEERFR-LEEEQKRLD-EIRRLEEES-----LRLEEIRRIEE 268

Human   941 LRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIAD 1005
            .:|.|.:..:|: :|..|||..::||.|:|:.||:..|          ::|..||.:..:|:..:
 Worm   269 EKKRIEEIRRQE-EEQQRIELERREEERRLESERRAEE----------ERKREEEAKLQEQRRRE 322

Human  1006 LREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERFRLDAWKRAEAIESSLEVEKKDK 1070
            ..::.||:..::   |.|.:.:.:.|.|.    .||||     |.:..::...:.||.:|||||.
 Worm   323 QEDEHKRRMEEY---HRREQERQEALKRR----EEEIK-----RREEGEKTRTVSSSEKVEKKDP 375

Human  1071 LANTSVRFQNSQISSGTQV 1089
            ..:..|..|....|...::
 Worm   376 CVHYPVLTQGQSFSRSIEL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPAPNP_060921.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..211
Alpha/beta-tubulin binding. /evidence=ECO:0000269|PubMed:19131341 319..394
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..414
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 436..479
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..551
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..789
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 845..865
SMC_N <886..1148 CDD:481474 51/204 (25%)
Interaction with STIL. /evidence=ECO:0000269|PubMed:22020124, ECO:0000269|PubMed:25385835 895..1338 50/195 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1096..1153
Tcp10_C 1152..1180 CDD:462118
Tcp10_C 1225..1253 CDD:462118
Tcp10_C 1261..1289 CDD:462118
Tcp10_C 1296..1325 CDD:462118
ttr-14NP_509801.1 TTR-52 27..106 CDD:460046
Blue background indicates that the domain is not in the aligned region.

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