DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKCG and aPKC

DIOPT Version :10

Sequence 1:NP_001303258.1 Gene:PRKCG / 5582 HGNCID:9402 Length:710 Species:Homo sapiens
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:687 Identity:236/687 - (34%)
Similarity:317/687 - (46%) Gaps:221/687 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     6 PGVGDSEGGPRPLFCRKGALRQKVVHEVKSHKFTARFFKQPTFCSHCTDFIWGIGKQGLQCQVCS 70
            ||: ..:|..|.:: |:||.|.:.::.|..|.|.|:.|.:..||::|.|.|||:|:||.:|..|.
  Fly   470 PGL-SCDGEDRSIY-RRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFKCIQCK 532

Human    71 FVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCE 135
            .:||::||:.|...|        ||.|....|.|....|.|                        
  Fly   533 LLVHKKCHKLVQKHC--------TDQPEPLVKERAEESSDP------------------------ 565

Human   136 MNVHRRCVRSVPSLCGVDHTERRGRLQLEIRAPTADEIHVTVGEARNLIPMDPNGLSDPYVKLKL 200
                      :|                                    :|:.|.    ||     
  Fly   566 ----------IP------------------------------------VPLPPL----PY----- 575

Human   201 IPDPRNLTKQKTRTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSE 265
                                                                    .|||.|.  
  Fly   576 --------------------------------------------------------EAMSGGA-- 582

Human   266 LLKAPVDGWYKLLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPS 330
                                                 |||    |.::...       |.:| |.
  Fly   583 -------------------------------------EAC----ETHDHAH-------IVAP-PP 598

Human   331 PTDPKRCFFGASPG---RLHISDFSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIVQDDD 392
            |.||      ..||   :..::||..:.|:|:||:.||::.|.|.:..:||:|::||.::..|:|
  Fly   599 PEDP------LEPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDED 657

Human   393 VDCTLVEKRVLALGGRGPGGRPHFLTQLHSTFQTPDRLYFVMEYVTGGDLMYHIQQLGKFKEPHA 457
            :|....||.|.......|     ||..|||.||||.||:||:|:|.|||||||:|:..:..|.||
  Fly   658 IDWVQTEKHVFETASNHP-----FLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHA 717

Human   458 AFYAAEIAIGLFFLHNQGIIYRDLKLDNVMLDAEGHIKITDFGMCKENVFPGTTTRTFCGTPDYI 522
            .||||||::.|.|||.:||||||||||||:||.|||||:||:|||||.:.||.||.||||||:||
  Fly   718 RFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYI 782

Human   523 APEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPF---------DGEDEEELFQAIMEQTVTYPKSL 578
            ||||:..:.||.|||||:.||||||||||:.||         |...|:.|||.|:|:|:..|:||
  Fly   783 APEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSL 847

Human   579 SREAVAICKGFLTKHPGKRLGSGPDGE-PTIRAHGFFRWIDWERLERLEIPPPFRPR-PCGRSGE 641
            |..|.::.||||.|:|..|||...:.. ..|.:|.||:.:|||.|||.::.|||:|| ...|...
  Fly   848 SVRAASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLA 912

Human   642 NFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNP 678
            ||...||..|..|||.|..|:.:|||::|:||.||||
  Fly   913 NFPPEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYVNP 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCGNP_001303258.1 C1_cPKC_rpt1 34..91 CDD:410383 22/56 (39%)
C1_cPKC_rpt2 101..154 CDD:410386 5/52 (10%)
C2_PKC_alpha_gamma 158..289 CDD:175992 8/130 (6%)
STKc_cPKC 354..677 CDD:270739 172/333 (52%)
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 23/61 (38%)
STKc_aPKC 620..947 CDD:270740 171/331 (52%)

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