DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCG and pck1

DIOPT Version :10

Sequence 1:NP_001303258.1 Gene:PRKCG / 5582 HGNCID:9402 Length:710 Species:Homo sapiens
Sequence 2:NP_593737.2 Gene:pck1 / 2542293 PomBaseID:SPAC17G8.14C Length:988 Species:Schizosaccharomyces pombe


Alignment Length:688 Identity:242/688 - (35%)
Similarity:337/688 - (48%) Gaps:134/688 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    21 RKGALRQK---VVHEVKSHKFTARFFKQPTFCSHCTD-FIWGIGKQGLQCQVCSFVVHRRCHEFV 81
            |:||:|||   ||.....|:|..|.|.|...|:.|.: |.:   ..||||:.||||.|::|...|
pombe   396 RQGAIRQKKEDVVASQVGHQFVQRQFYQIMRCAVCAELFSY---SPGLQCENCSFVCHKKCVTKV 457

Human    82 TFECPGAGKGPQTD----DPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRC 142
            ...|.......::|    ..|..|:|...:.....:|.|||..|........||..|.:..|.:|
pombe   458 LASCIAQSNSEKSDFGGLRYRIPHRFEPFNSLGAQWCAHCGFFLPLRRKDCFKCVECGITCHGQC 522

Human   143 VRSVPSLCGVDHTERRGRL-QLEI-RAPTADEIHVTVGEARNLIPMDPNGLSDPYVKLKLIPDPR 205
            ...:|..||:.:..:...| :||: :.|...|:              ||                
pombe   523 AHLIPDYCGMSNDLKHQLLTELEVSKRPKKPEL--------------PN---------------- 557

Human   206 NLTKQKTRTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDF--MGAMSFGVSELLK 268
              .:.||...|....|:                           :|:|.|  :..:|.|   ||.
pombe   558 --QENKTTNEKVYRKPL---------------------------SSQNTFDTLPTISQG---LLA 590

Human   269 APVDGWYKLLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSS-PIPS-----P 327
            |                 ..||....|.|.|.|..      |....:.:.|||| |.|:     |
pombe   591 A-----------------TQPVTSVLNTSPLPKTP------EKDRSLNVTPSSSTPTPASVLAPP 632

Human   328 SPS------------PTDPKRCFFGASPGRLHISDFSFLMVLGKGSFGKVMLAERRGSDELYAIK 380
            |.:            |..|:|    ....|:.:.||:||.|||||:||||||||.:.:.:.||||
pombe   633 SSASLSSSKDANRSVPESPRR----EKKNRVTLDDFTFLAVLGKGNFGKVMLAEYKVNKKFYAIK 693

Human   381 ILKKDVIVQDDDVDCTLVEKRVLALGGRGPGGRPH-FLTQLHSTFQTPDRLYFVMEYVTGGDLMY 444
            :|||:.|:::::::....||.|..:..:    ..| ||..|.::|||..|:||||||:.|||||.
pombe   694 VLKKEAILKNEELESLKTEKHVFEVANK----EKHPFLLNLFASFQTSTRVYFVMEYILGGDLMV 754

Human   445 HIQQLGKFKEPHAAFYAAEIAIGLFFLHNQGIIYRDLKLDNVMLDAEGHIKITDFGMCKENVFPG 509
            |||: .:|....|.||.||:.:.|.:.|..||.||||||||::|..:|||:|.|:|:||||:..|
pombe   755 HIQR-QQFSVKRARFYGAEVCLALKYFHENGIAYRDLKLDNILLCPDGHIRIADYGLCKENMLLG 818

Human   510 TTTRTFCGTPDYIAPEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTY 574
            .||.||||||:::||||:..|.|.|.||||:||||:|:||.||.||.||||||:|.||:.....:
pombe   819 NTTSTFCGTPEFMAPEILLEQQYSKDVDWWAFGVLMYQMLLGQSPFKGEDEEEIFDAILSDEPLF 883

Human   575 PKSLSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWIDWERLERLEIPPPFRP---RPC 636
            |.::..:||::.:|.||:.|.:||||||.....:.||.||..|.|:.|......|.::|   .| 
pombe   884 PINMPADAVSLLRGLLTRDPNQRLGSGPKDANEVMAHPFFASIVWDDLYNKLYEPSYKPLINDP- 947

Human   637 GRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFT 674
             |...|||:.||.|.|.|||.: .||....|..|:||:
pombe   948 -RDLNNFDEEFTSACPTLTPVN-TVLTRQQQECFRGFS 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCGNP_001303258.1 C1_cPKC_rpt1 34..91 CDD:410383 20/57 (35%)
C1_cPKC_rpt2 101..154 CDD:410386 15/52 (29%)
C2_PKC_alpha_gamma 158..289 CDD:175992 19/134 (14%)
STKc_cPKC 354..677 CDD:270739 156/325 (48%)
pck1NP_593737.2 HR1_PKC-like_1_fungi 2..73 CDD:212011
HR1 111..180 CDD:469609
C2 212..316 CDD:472691
C1_ScPKC1-like_rpt1 413..464 CDD:410372 20/53 (38%)
C1_ScPKC1-like_rpt2 477..535 CDD:410373 16/57 (28%)
STKc_PKC 668..983 CDD:270722 154/322 (48%)
Blue background indicates that the domain is not in the aligned region.

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