DRSC/TRiP Functional Genomics Resources

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Protein Alignment tcf21 and Fer1

DIOPT Version :9

Sequence 1:NP_001032770.1 Gene:tcf21 / 558148 ZFINID:ZDB-GENE-051113-88 Length:176 Species:Danio rerio
Sequence 2:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster


Alignment Length:142 Identity:50/142 - (35%)
Similarity:72/142 - (50%) Gaps:20/142 - (14%)


- Green bases have known domain annotations that are detailed below.


Zfish     2 STGSISDVDEF----HESELLDGLPKFGSGKDPGTSNESTEDSSNCEGASVSECTGKRRKSANMR 62
            :..|.|..|.|    |.||..|....:.||.:  :..|:||.:.         |...||.....|
  Fly    24 TNASTSSSDYFFGDEHSSESDDEDDAYSSGFN--SDQENTEKTF---------CPFSRRSHKPRR 77

Zfish    63 RSAPNGVAQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAH 127
            ....:.:||     ||.|||.|||.||:.:::||..|:|.:|.:|.:.:|||:|||:||.|||..
  Fly    78 LKCASQMAQ-----QRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITF 137

Zfish   128 LRQILANDKYEN 139
            |.:::..||..|
  Fly   138 LSEMVKKDKNGN 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tcf21NP_001032770.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84 24/85 (28%)
HLH 77..129 CDD:278439 27/51 (53%)
Fer1NP_001262334.1 HLH 92..144 CDD:197674 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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