DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AXL and kin-5

DIOPT Version :9

Sequence 1:NP_068713.2 Gene:AXL / 558 HGNCID:905 Length:894 Species:Homo sapiens
Sequence 2:NP_501793.1 Gene:kin-5 / 188489 WormBaseID:WBGene00002193 Length:533 Species:Caenorhabditis elegans


Alignment Length:465 Identity:121/465 - (26%)
Similarity:212/465 - (45%) Gaps:94/465 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   437 LVKEPSTPAFSWPWWYVLLGAVVAAACVLILALFLVHRRKKETRYGE-------VFEPTVERGEL 494
            |.||        ||::.||........:.....|||  |..:.:.||       |:...:|.   
 Worm    11 LAKE--------PWYHGLLPREDMKQLLTQRGDFLV--RFTDPKVGEPRKFVLSVYVGVIED--- 62

Human   495 VVRYRVRKSYSRRTTEATLNSLGISEELKEKLRDVMVDRHK------------------------ 535
             :|:.|.:.::        |...:.::....:.|::...|:                        
 Worm    63 -IRHYVIREHN--------NKFAVDKKWFSSIADLLNYYHRSKEPVAGGPETVIIRPIGREPWEK 118

Human   536 ----VALGKTLGEGEFGAVMEGQLNQDDSILKVAVKTMKIAICTRSELEDFLSEAVCMKEFDHPN 596
                |.|.|.||||.||.|..|::...:::.|.|:|..|:...|:.::::.:.||..|::|.|||
 Worm   119 QHSDVTLIKKLGEGAFGEVQLGEIRIGNTVKKAAIKLAKLESLTKEQIKEIMHEARLMRKFKHPN 183

Human   597 VMRLIGVCFQGSERESFPAPVVILPFMKHGDLHSFLLYSRLGDQPVYLPTQMLVKFMADIASGME 661
            |:...||. .|.|    |. :||:....:|.|.|: |...:|..|:.....|:::    ...|:|
 Worm   184 VVTFYGVA-AGQE----PL-MVIMELADNGALDSY-LKKNIGSLPISKKHTMVLQ----AGLGLE 237

Human   662 YLSTKRFIHRDLAARNCMLNENMSVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVY 726
            ||.:.:.||||:|:|||:.. |..|.::|||||::.|:   ||.....|:|::|:|.|......|
 Worm   238 YLHSLQIIHRDIASRNCLYG-NGQVKISDFGLSREGYS---YRMNPHKKVPIRWLAPEVPRTGFY 298

Human   727 TSKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPADCLDGLYALMS-RCWELNP 790
            |.|:||:::||..||:...|..||||::.:|:...::.|.|:...|:....:...:: |......
 Worm   299 TPKTDVFAYGVMCWEVYHDGIEPYPGMKVAEVLPRVQNGYRMPFEANVPPAIVRFITYRICAGAE 363

Human   791 QDRPSFTE-LREDLENTLKALPPA-------QEPDEILYVNMDEGGGYPEP-------PGAAGGA 840
            ::|.:.:| :||.|  ||:....|       :.||.|...|:::    |:.       |..:...
 Worm   364 EERVTMSEAVRELL--TLEGFDQAPGSNSYFELPDHIPMENIEQ----PKKIQVSNILPYMSKPV 422

Human   841 DPPTQPDPKD 850
            .||.:|:.::
 Worm   423 APPFEPERQE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AXLNP_068713.2 interaction with Gas6 26..92
Ig 53..119 CDD:319273
Ig2_Axl_Tyro3_like 141..222 CDD:143226
FN3 225..328 CDD:238020
fn3 335..418 CDD:306538
PTKc_Axl 535..811 CDD:270660 91/305 (30%)
kin-5NP_501793.1 SH2_Fps_family 11..99 CDD:198224 20/109 (18%)
TyrKc 123..376 CDD:197581 87/267 (33%)
PTKc 127..376 CDD:270623 85/263 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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