DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCB and for

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster


Alignment Length:429 Identity:124/429 - (28%)
Similarity:210/429 - (48%) Gaps:48/429 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   228 RFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-----SVDGWFKLLSQEEGEYFN 287
            |..:|:.|......:.     :..:.||.|..:....:|:.|     |.||...|:.  :.|.||
  Fly   684 RVTIKQQDTQEEKFIR-----MLGKGDFFGEKALQGDDLRTANIICESADGVSCLVI--DRETFN 741

Human   288 VPVPPEGSEAN-EELRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKG 351
            ..:      :| :|::.:::.....:..|:.||             .|| :.|||...:..||.|
  Fly   742 QLI------SNLDEIKHRY
DDEGAMERRKINEE-------------FRD-INLTDLRVIATLGVG 786

Human   352 SFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 415
            .||:|.|.:..| :...:|:|.:||..:::....:..|.||.::. .....|:.:|...|:....
  Fly   787 GFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMG-EANCQFIVKLFKTFKDKKY 850

Human   416 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI 480
            ||.:||...||:|...::..|.|.:....||.|.:.....:|.|:.|||||||.:|::|:..|::
  Fly   851 LYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYV 915

Human   481 KIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 545
            |:.|||..|: :..|..|.||||||:|:|||:|..:.:..|.|:|:.|||::|:|.|..||.|.|
  Fly   916 KLVDFGFAKK-LQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLMFELLTGTPPFTGSD 979

Human   546 EDELFQSIME--HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL 608
            ....:..|::  ..:.:|:::::.|..:.|.|...:|.:|||....|..:|::|.:|....|..|
  Fly   980 PMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGFYWWGL 1044

Human   609 ERKEIQPPYKPKACG-RNAENFDRFFTRHPPVLTPPDQE 646
            :...::||.||.... .:..|||.:         |||.|
  Fly  1045 QNCTLEPPIKPAVKSVVDTTNFDDY---------PPDPE 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992 15/65 (23%)
STKc_cPKC_beta 341..663 CDD:270767 100/310 (32%)
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374
CAP_ED 520..629 CDD:237999
CAP_ED 638..754 CDD:237999 17/82 (21%)
STKc_cGK 783..1043 CDD:270724 87/261 (33%)
Blue background indicates that the domain is not in the aligned region.

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