DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCB and Pkc98E

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_524545.2 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster


Alignment Length:680 Identity:314/680 - (46%)
Similarity:404/680 - (59%) Gaps:134/680 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    22 RKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSC 86
            |:||:|:: ||:|..|||.|.|.:||||||||.:||||.||||:|||||..||||:||..|...|
  Fly   163 RRGAMRRR-VHQVNGHKFMATFLRQPTFCSHCREFIWGIGKQGYQCQVCTLVVHKKCHLSVVSKC 226

Human    87 PG-ADKGPASDD--PRSK-------HKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHK 141
            || .|:.||..:  |..:       |:|.:|:|...||||||||||||||.||::|:||.|||||
  Fly   227 PGMRDEQPAKVEMVPAGQRFNVNLPHRFVVHSYKRFTFCDHCGSLLYGLIKQGLQCETCGMNVHK 291

Human   142 RCVMNVPSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDAKNLVPMDPNGLSDPYVKLKLIPDPKS 206
            ||..||.:.||. :|::...|                            ||    .|.:.||.:.
  Fly   292 RCQKNVANTCGI-NTKQMAEI----------------------------LS----SLGISPDKQQ 323

Human   207 ESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKASV 271
            ..:.|      .||.:..|                           :::..||            
  Fly   324 PRRSK------YLNQQGGE---------------------------DNYGASL------------ 343

Human   272 DGWFKLLSQEEGEYFNVPVPPEGSEANEELRQKFERAKISQGTKVPEEKTTNTVSKFDNNG---- 332
                                  |::.:....|.|....:|..:..  ..||...|.::::.    
  Fly   344 ----------------------GADGDGAPGQSFRSCALSVDSLA--TSTTTMTSGYNSSSCMSL 384

Human   333 --------------NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD 383
                          ...:..|.||||:.||||||||||||:|:|||||:||:|:||||.:|||||
  Fly   385 AVTGSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKKDAIIQDDD 449

Human   384 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 448
            |:|||.|||:|||....||||.|||||||.|||:||||||||||||:.||:..||:...|.||||
  Fly   450 VDCTMTEKRILALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRFEASRAAFYAA 514

Human   449 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEII 513
            |:.:.|.||.:.|:|||||||||::||.|||.|:||||||||.|.:|:.|.|||||||||||||:
  Fly   515 EVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCGTPDYIAPEIL 579

Human   514 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTK 578
            ..|.||.||||||.|||:|||:|||.|||.::|||||.|||..:|.||..:|:|||:|.||.:||
  Fly   580 KEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREAVSILKGFLTK 644

Human   579 HPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACG-RNAENFDRFFTRHPPVLTP 642
            :|.:||||..: |.:|::|.||..:||::||::.|:||::||... |:|.|||..||:..|||||
  Fly   645 NPEQRLGCTGD-ENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDPVLTP 708

Human   643 PDQEVIRNIDQSEFEGFSFVNSEFLKPEVK 672
            ...||:|.|:|.||.||||||.:| .||.|
  Fly   709 IGNEVVRCINQDEFAGFSFVNPKF-GPERK 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383 37/57 (65%)
C1_cPKC_rpt2 102..155 CDD:410386 34/52 (65%)
C2_PKC_alpha_gamma 159..289 CDD:175992 12/129 (9%)
STKc_cPKC_beta 341..663 CDD:270767 206/322 (64%)
Pkc98ENP_524545.2 C2_PKC_epsilon 1..134 CDD:175981
C1_nPKC_epsilon-like_rpt1 171..230 CDD:410385 39/58 (67%)
C1_nPKC_epsilon-like_rpt2 250..304 CDD:410388 34/54 (63%)
STKc_nPKC_epsilon 412..729 CDD:270743 202/317 (64%)
Blue background indicates that the domain is not in the aligned region.

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