DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKCB and inaC

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster


Alignment Length:682 Identity:349/682 - (51%)
Similarity:467/682 - (68%) Gaps:30/682 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     4 PAAGPPPS-------EGEESTVRF----ARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFI 57
            ||||....       .||.:.|.:    .||||:::|.:..|..|:|..||||.||:|.||.|||
  Fly    28 PAAGAGKGPGNLLEITGEANIVNYMKNRLRKGAMKRKGLEMVNGHRFGVRFFKNPTYCGHCKDFI 92

Human    58 WGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLL 122
            ||||||||||:.|.|.:|::|.:||.|.|||.|....:|..:.||.:...||::|||||.||.||
  Fly    93 WGFGKQGFQCEECRFNIHQKCCKFVVFKCPGKDTDFDADCAKVKHGWISTTYTTPTFCDECGLLL 157

Human   123 YGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDAKNLVPMD 187
            :|:.|||:||:.|.:|||..|...||.:||.|.:|.||::.:...:..:.|.|.:::|.||:|||
  Fly   158 HGVAHQGVKCENCNLNVHHACQETVPPMCGADISEVRGKLLLYVELKGNNLKVDIKEAANLIPMD 222

Human   188 PNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSR 252
            .||.||||:.:::.||....:|:|||||:.:|||.:||||.|:|:..|:|:||.:|:||||.|||
  Fly   223 TNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLIEVWDWDRTSR 287

Human   253 NDFMGSLSFGISELQKASVDGWFKLLSQEEGEYFNVPVPPEGSEANEELRQKFERAKISQGTKVP 317
            ||||||.||.:.||||..||||:|.|||.|||::|:|..   ...|:..|.:.|         |.
  Fly   288 NDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCV---DAFNDIARLRDE---------VR 340

Human   318 EEKTTNTVSKFDNN------GNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 376
            .::..|...:.||.      ..||.::..||||:.|:||||||||:|:||:|||||||||:|:||
  Fly   341 HDRRPNEKRRMDNKDMPHNMSKRDMIRAADFNFVKVIGKGSFGKVLLAERRGTDELYAVKVLRKD 405

Human   377 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP 441
            |:||.||:|..|.||::|||.|:||||..:||||||||||:|||||..|||||||:||.|||||.
  Fly   406 VIIQTDDMELPMNEKKILALSGRPPFLVSMHSCFQTMDRLFFVMEYCKGGDLMYHMQQYGRFKES 470

Human   442 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPD 506
            .|:|||.|:||.||||..:.||||||||||::||.|||:|:.|||:.||.:.:..||:||||||:
  Fly   471 VAIFYAVEVAIALFFLHERDIIYRDLKLDNILLDGEGHVKLVDFGLSKEGVTERQTTRTFCGTPN 535

Human   507 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 571
            |:||||::|.||..:.|||:|||||:|.:||||||||:||..:|::|.:....:||..|.||:.|
  Fly   536 YMAPEIVSYDPYSIAADWWSFGVLLFEFMAGQAPFEGDDETTVFRNIKDKKAVFPKHFSVEAMDI 600

Human   572 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTR 635
            ....:||.|..|||.|....::|..|.|||.:||:|.|..|::||.||....| :..|||..||:
  Fly   601 ITSFLTKKPNNRLGAGRYARQEITTHPFFRNVDWDKAEACEMEPPIKPMIKHRKDISNFDDAFTK 665

Human   636 HPPVLTPPDQEVIRNIDQSEFEGFSFVNSEFL 667
            ....|||.|:..:.|:||::|.||||:|.||:
  Fly   666 EKTDLTPTDKLFMMNLDQNDFIGFSFMNPEFI 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383 35/56 (63%)
C1_cPKC_rpt2 102..155 CDD:410386 27/52 (52%)
C2_PKC_alpha_gamma 159..289 CDD:175992 69/129 (53%)
STKc_cPKC_beta 341..663 CDD:270767 188/322 (58%)
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342 32/51 (63%)
C1 137..190 CDD:412127 27/52 (52%)
C2_PKC_alpha_gamma 194..324 CDD:175992 69/129 (53%)
STKc_PKC 375..692 CDD:270722 183/316 (58%)

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