DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCB and Pkn

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster


Alignment Length:377 Identity:160/377 - (42%)
Similarity:235/377 - (62%) Gaps:9/377 - (2%)


- Green bases have known domain annotations that are detailed below.


Human   291 PPEGSEANEELRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGK 355
            |...:.:|...:|:.:|..:::|.:..|.....|........|...:.:.:|..|.|||:|.|||
  Fly  1123 PSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGK 1187

Human   356 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMDRLYF 418
            |:||:.:..::.||:|.|||..:|..|:||..:.|||:..:..  :.|||..|:|||||...:.|
  Fly  1188 VILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCF 1252

Human   419 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA 483
            ||||..|||||.|| ....|.||.||||||.:.:||.:|....||||||||||::||:||::|||
  Fly  1253 VMEYAAGGDLMMHI-HTDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIA 1316

Human   484 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 548
            |||:|||.:..|..|.||||||:::|||::....|.::||||..|||::|||.|::||.|:||:|
  Fly  1317 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 1381

Human   549 LFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 613
            :|.||:...|.||:.:|.||:|:.:.|:.|:|.:|||.......|:|:.||||.|.|:.|..:::
  Fly  1382 VFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKV 1446

Human   614 QPPYKPKACG-RNAENFDRFFTRHPPVLTPPDQEVIRNIDQSE---FEGFSF 661
            :||:.|.... .:..|||..||.....||||.:.  |::.:.|   |:.||:
  Fly  1447 KPPFVPTINHLEDVSNFDEEFTSEKAQLTPPKEP--RHLTEEEQLLFQDFSY 1496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992
STKc_cPKC_beta 341..663 CDD:270767 152/327 (46%)
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 152/326 (47%)
Blue background indicates that the domain is not in the aligned region.

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