DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKCB and CG4839

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster


Alignment Length:628 Identity:158/628 - (25%)
Similarity:275/628 - (43%) Gaps:127/628 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    88 GADKGPASDDPRSKHKFKIH---TYSSPTF-------------CDHCGSLLYGLIHQGMKCDTCM 136
            ||::...|.|..:....::.   .|..|.|             .:...:|:...|.:....:..|
  Fly   372 GAEESHKSSDSSTPKTHRVEGGLIYVRPNFPIQSDIEIESIAKDEGTRNLIRTAIERNDFLNNLM 436

Human   137 MNVHKRCVMNV--------PSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDAKNLVPMDPNGLSD 193
            ....|..|:|.        .||...:| |....||:.|....||    :|..:.:....|   :.
  Fly   437 DKERKEMVINAMAPASYRKHSLIIREH-EEGSEIYVSAEGQYDV----IRGGQLVASFGP---AT 493

Human   194 PYVKLKLIPDPKSESKQKTKT---------------IKCSLNPEWNETFRFQ-----LKESDKDR 238
            .:.:|.::.:...::..:..|               ::.|.:.|..|..:|.     |:|.|:..
  Fly   494 VFGELAILYNAPRQASIEAATDARVWKIARETFRAIMQISGSREREENLQFLRSAPFLQEFDQSL 558

Human   239 RLSVEIWDWDLTSR----------------NDF----MGSLSF-GISELQKASVDGWFKLLSQEE 282
            .|.|.    ||..|                |:|    .|:::. .:.|.|:..:     :.:::.
  Fly   559 LLKVV----DLLQRKFYETDSCIVREGELGNEFYIIRCGTVTIKKLDEQQQEQI-----VANRKR 614

Human   283 GEYFNVPVPPEGSEA--NEELRQKFERAKISQGTKV---------------------PEEKTTNT 324
            |:||       |.:|  |.::||....|. :.||:|                     |..:..:|
  Fly   615 GDYF-------GEQALLNADVRQASVYAD-APGTEVLMLDREAFISYLGTIKQLREKPSSQRNDT 671

Human   325 VSK-------FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD 382
            ..:       |||  ...::.:::...:..||.|:||:|.|...  ..:..|:||:||..|::.|
  Fly   672 SGRSSTKSLEFDN--EYSQVAISELKKIATLGCGAFGRVDLVAY--NQQALALKIIKKIEVVKQD 732

Human   383 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 447
            .:|....||.|:....:.||:.||:..::....:||:||...|||:...:.:...|.|..|.|.|
  Fly   733 QIEHVYNEKNVMIKCRQSPFIVQLYRTYRNDKYVYFLMEACMGGDVWTVMSKRQYFDEKTAKFIA 797

Human   448 AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEI 512
            ..:.....:|.|...||||||.:|:||.::|:.|:.|||..| .:.....|.||.|||:|:||||
  Fly   798 GCVVEAFDYLHSHHFIYRDLKPENLMLGTDGYCKLVDFGFAK-FVRQNEKTNTFAGTPEYVAPEI 861

Human   513 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--HNVAYPKSMSKEAVAICKGL 575
            |..:.:.::||:||.|:|:||:|.|:.||.|.::.:::|.|:.  ..:..|..:.|.|..:.:.|
  Fly   862 ILDRGHDRAVDYWALGILVYELLVGKTPFRGVNQIKIYQQILSGIDVIHMPSRIPKSAQHLVRHL 926

Human   576 MTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 618
            ..:.|.:|||...:|..|||.|::|..:||::|:.|::..|.|
  Fly   927 CKQLPAERLGYQRKGIADIKRHSWFESLDWQRLKLKQLPSPIK 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383 2/3 (67%)
C1_cPKC_rpt2 102..155 CDD:410386 11/76 (14%)
C2_PKC_alpha_gamma 159..289 CDD:175992 29/170 (17%)
STKc_cPKC_beta 341..663 CDD:270767 98/280 (35%)
CG4839NP_609349.1 CAP_ED 431..539 CDD:237999 19/115 (17%)
CAP_ED 550..663 CDD:237999 25/129 (19%)
STKc_cGK 700..957 CDD:270724 93/259 (36%)

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