DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCB and Pka-C1

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster


Alignment Length:359 Identity:131/359 - (36%)
Similarity:194/359 - (54%) Gaps:48/359 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   296 EANEELRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSE 360
            :|.||...|:.|            ..|||.:            |.||..:..||.||||:||:.:
  Fly    24 QAKEEFEDKWRR------------NPTNTAA------------LDDFERIKTLGTGSFGRVMIVQ 64

Human   361 RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL-ALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 424
            .|.|.:.||:|||.|..|::...||.|:.|||:| |:  :.|||..|...|:....||.|:|||.
  Fly    65 HKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQAI--QFPFLVSLRYHFKDNSNLYMVLEYVP 127

Human   425 GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 489
            ||::..|:::||||.|||:.||||:|.:...:|....:||||||.:|:::||:|::|:.|||..|
  Fly   128 GGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAK 192

Human   490 E---NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 551
            .   ..|      |.||||:|:|||||..:.|.|:|||||.|||:|||.||..||..:...::::
  Fly   193 RVKGRTW------TLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYE 251

Human   552 SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 616
            .|:...|.:|.....:...:.:.|:.....||.|....|..|||...:|...||..:.:|:|:.|
  Fly   252 KIVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAP 316

Human   617 YKPKACG-RNAENFDRFFTRHPPVLTPPDQEVIR 649
            :.|:..| .:..|||.:           ::|.:|
  Fly   317 FIPRCKGPGDTSNFDDY-----------EEEALR 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992
STKc_cPKC_beta 341..663 CDD:270767 122/314 (39%)
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 120/296 (41%)
Blue background indicates that the domain is not in the aligned region.

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