DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKCB and Pkcdelta

DIOPT Version :10

Sequence 1:NP_002729.2 Gene:PRKCB / 5579 HGNCID:9395 Length:673 Species:Homo sapiens
Sequence 2:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster


Alignment Length:357 Identity:193/357 - (54%)
Similarity:247/357 - (69%) Gaps:15/357 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   320 KTTNTVSKFDNNGN-------RDRMK---LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK 374
            :|:.|.|:|..:|.       ..|.|   :.||:||.||||||||||:|:|.:.|...||:|.||
  Fly  1534 ETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLK 1598

Human   375 KDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK 439
            ||||::||||:.|::|::||||..|.|:|..|...|||...|:|||||:||||||:|||:.|||.
  Fly  1599 KDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFS 1663

Human   440 EPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGT 504
            |..|.||.|||..||.||..|||||||||||||:||.|||::||||||||..|:...|..:||||
  Fly  1664 EERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGT 1728

Human   505 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAV 569
            |||:|||||..:.|.::||||:|||||||||.||:||.|.||||||.||......:|..:|.||.
  Fly  1729 PDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEAT 1793

Human   570 AICKGLMTKHPGKRLGC--GPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKA-CGRNAENFDR 631
            .|.|||:.|...||:|.  .|.|  ||.:|.|||.|||..||:::|:||:||:. ...:.:.|||
  Fly  1794 GILKGLLEKDYTKRIGSQYSPAG--DIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDR 1856

Human   632 FFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVN 663
            .|||....|||.|:|::.::||.:|.||::.|
  Fly  1857 VFTRERVRLTPIDKEILASMDQKQFHGFTYTN 1888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKCBNP_002729.2 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992
STKc_cPKC_beta 341..663 CDD:270767 185/324 (57%)
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 182/321 (57%)
Blue background indicates that the domain is not in the aligned region.

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