DRSC/TRiP Functional Genomics Resources

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Protein Alignment zgc:175214 and RNF122

DIOPT Version :9

Sequence 1:NP_001108199.1 Gene:zgc:175214 / 557610 ZFINID:ZDB-GENE-080303-32 Length:155 Species:Danio rerio
Sequence 2:NP_079063.2 Gene:RNF122 / 79845 HGNCID:21147 Length:155 Species:Homo sapiens


Alignment Length:137 Identity:85/137 - (62%)
Similarity:102/137 - (74%) Gaps:3/137 - (2%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MQPFQWCNGCLCGLGL--QHSDCDMTEEDIYRLPLNVYVIVLGIGMFIFMLSVIFCCY-LFRLKQ 62
            |.||||||||.|||||  .:..|.|.......||||:|:::.|.|:|:||||:||||| :.:|:.
Human     1 MHPFQWCNGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRN 65

Zfish    63 QGTREQYSYNEVVLKGAGKKLSLLGQPCAVCLEEFKTRDELGVCPCSHTFHKKCLLKWLEIRSVC 127
            |...|:|.|.||||||..|||.|.||.||||||:||.:|||||.||.|.||:|||:||||:|.||
Human    66 QAQSERYGYKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVC 130

Zfish   128 PMCNKPI 134
            |||||||
Human   131 PMCNKPI 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zgc:175214NP_001108199.1 zf-RING_2 90..130 CDD:290367 29/39 (74%)
RNF122NP_079063.2 RING-H2_RNF24_like 91..137 CDD:319383 34/45 (76%)
RING-H2 finger (C3H2C3-type) 93..133 CDD:319383 29/39 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1625209at2759
OrthoFinder 1 1.000 - - FOG0001067
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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