DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRKAG1 and SNF4

DIOPT Version :10

Sequence 1:NP_001193638.1 Gene:PRKAG1 / 5571 HGNCID:9385 Length:340 Species:Homo sapiens
Sequence 2:NP_011400.1 Gene:SNF4 / 852763 SGDID:S000003083 Length:322 Species:Saccharomyces cerevisiae


Alignment Length:337 Identity:120/337 - (35%)
Similarity:183/337 - (54%) Gaps:30/337 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     6 SSDSSPAVENEHPQETPESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVR 70
            :.||...|..|. |...||    ...|:.|...||::|.|.:|:|.||||.|||:...|:.|.:.
Yeast     4 TQDSQEKVSIEQ-QLAVES----IRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIV 63

Human    71 AAPLWDSKKQSFVVLRALSCPLGMLTITDFINILHRYY----KSALVQIYELEEHK-IETWREVY 130
            :|||||||...|.         |:||.|||||::..|:    |..||...:|:..| ||....|.
Yeast    64 SAPLWDSKTSRFA---------GLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVD 119

Human   131 LQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN----TLYILTHKRILKFLKLFITE 191
            ..|:    ..|.|:..||:|...::.::..|:|:||.:...    .:.:||..|||||:.|...|
Yeast   120 QLDT----ASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE 180

Human   192 FPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI 256
               ..|:...:.:|.|.|..|:...:.||||...:.:..|.|||::|::||.|.::::|..:||:
Yeast   181 ---THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL 242

Human   257 NLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGI 321
            .|.....||:|.:||.:||..||..||||..|..::.|.||::.:.:|.|||..|||:...:.|:
Yeast   243 GLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGV 307

Human   322 VSLSDILQALVL 333
            ::|||||:.::|
Yeast   308 LTLSDILKYILL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKAG1NP_001193638.1 CBS_euAMPK_gamma-like_repeat1 38..183 CDD:341388 54/153 (35%)
CBS repeat 45..127 CDD:341388 36/86 (42%)
CBS repeat 139..183 CDD:341388 13/47 (28%)
CBS_euAMPK_gamma-like_repeat2 209..332 CDD:341399 48/122 (39%)
CBS repeat 210..275 CDD:341399 22/64 (34%)
CBS repeat 286..329 CDD:341399 16/42 (38%)
SNF4NP_011400.1 CBS_euAMPK_gamma-like_repeat1 30..172 CDD:341388 54/154 (35%)
CBS repeat 38..110 CDD:341388 33/80 (41%)
CBS repeat 124..172 CDD:341388 13/47 (28%)
CBS_euAMPK_gamma-like_repeat2 195..318 CDD:341399 48/122 (39%)
CBS repeat 196..261 CDD:341399 22/64 (34%)
CBS repeat 272..315 CDD:341399 16/42 (38%)

Return to query results.
Submit another query.