DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKAG1 and aakg-3

DIOPT Version :10

Sequence 1:NP_001193638.1 Gene:PRKAG1 / 5571 HGNCID:9385 Length:340 Species:Homo sapiens
Sequence 2:NP_508509.3 Gene:aakg-3 / 189836 WormBaseID:WBGene00021527 Length:425 Species:Caenorhabditis elegans


Alignment Length:342 Identity:106/342 - (30%)
Similarity:188/342 - (54%) Gaps:42/342 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    23 ESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVVLRA 87
            ::::.|||..::..:||:.:..::||:||...:.|:|||..|:.|.:|...:.||:.....    
 Worm    89 QNSDIVYTHLLQLSQCYEAMARNNKLIVFTNDISVRKAFNGLIYNCMRTGLVADSQTLEIT---- 149

Human    88 LSCPLGMLTITDFINILHRYYKSALVQIY--ELEEHK------------------IETWRE-VYL 131
                 |:|::||||.:|...:|      |  .|:|.|                  |..|:. :..
 Worm   150 -----GVLSVTDFIMVLMMLWK------YRENLDELKGTPLSHEDFRQMDIAYMPISRWKGCLET 203

Human   132 QDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPE 196
            :...||.:.|....|:|.||..|.:.:||||||:|.::|:..|||||:|||.::.......||||
 Worm   204 KGQLKPFINIGLKESIFRAVELLTKYRIHRLPVMDEKTGDCAYILTHRRILHYIWKHCALLPKPE 268

Human   197 FMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKG-RVVDIYSKFDVINLAA 260
            .:|:.:.:|:||::.|:......||:...|.:.:.:.:|.:|:|.:.. :|:::|::||..: ||
 Worm   269 CLSQRVVDLEIGSWKNLIFANEQTPLIECLDMLIDNNISGIPIVQKNTLKVLEVYTRFDAAS-AA 332

Human   261 EKTYNNLDVSVTKALQHRSHY----FEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGI 321
            ...:.:|.||||:|:|.|.:.    .:||:......||.::|...::..|||:.:||:..::|||
 Worm   333 FSDHIDLSVSVTRAIQERDYQNGIRRDGVVTANYTTTLWSLIEIFIDKNVHRIFMVDDRTILKGI 397

Human   322 VSLSDILQALVLTGGEK 338
            :||||:::.|||...:|
 Worm   398 ISLSDVIEFLVLRPTKK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKAG1NP_001193638.1 CBS_euAMPK_gamma-like_repeat1 38..183 CDD:341388 52/165 (32%)
CBS repeat 45..127 CDD:341388 26/101 (26%)
CBS repeat 139..183 CDD:341388 21/43 (49%)
CBS_euAMPK_gamma-like_repeat2 209..332 CDD:341399 38/127 (30%)
CBS repeat 210..275 CDD:341399 18/65 (28%)
CBS repeat 286..329 CDD:341399 15/42 (36%)
aakg-3NP_508509.3 CBS_pair_SF 103..255 CDD:449531 52/166 (31%)
CBS repeat 111..198 CDD:341358 26/101 (26%)
CBS repeat 211..255 CDD:341358 21/43 (49%)
CBS_pair_SF 281..408 CDD:449531 38/127 (30%)
CBS repeat 282..347 CDD:341358 18/65 (28%)
CBS repeat 362..405 CDD:341358 15/42 (36%)

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