DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRKAG1 and aakg-2

DIOPT Version :10

Sequence 1:NP_001193638.1 Gene:PRKAG1 / 5571 HGNCID:9385 Length:340 Species:Homo sapiens
Sequence 2:NP_510725.1 Gene:aakg-2 / 181736 WormBaseID:WBGene00020633 Length:423 Species:Caenorhabditis elegans


Alignment Length:354 Identity:120/354 - (33%)
Similarity:191/354 - (53%) Gaps:39/354 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     7 SDSSPAVENEHPQETPESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVR- 70
            |.|:...|::.......::...:...:..::||:.:|:|||:||||..|.:.|||..|:....| 
 Worm    18 SKSTTMTESDEVLPKTPNDKEAFARLLWINQCYEAMPSSSKMVVFDQGLLMHKAFNGLLAQSTRH 82

Human    71 ---AAPLWDSKKQSFVVLRALSCPLGMLTITDFINILHRYYKSA-----------LVQI--YELE 119
               :.|.:..|..            |:|::||||.::.:.|:..           :.||  .|:.
 Worm    83 VLLSDPDFGGKLD------------GILSVTDFIKVMLKIYRERTKCEKESTELDMTQIANEEIG 135

Human   120 EHKIETWRE-VYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILK 183
            ...|..:|| |..:.:.:|||.:..:.||.||...|..:::||:|||||..|:.|:|||||||||
 Worm   136 NLSIRQYRELVKKEGNLRPLVSVDASGSLLDAACILAEHRVHRIPVIDPLDGSALFILTHKRILK 200

Human   184 FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD-EKGRVV 247
            ||.||.......|::.||.:||.|||::.|.:|...|.:...|.|.:...||.||||: |..:||
 Worm   201 FLWLFGKHLAPLEYLHKSPKELGIGTWSGIRVVFPDTQLVDCLDILLNKGVSGLPVVERETFKVV 265

Human   248 DIYSKFDVINLAAEKTYNNLDVSVTKALQHRSH-----YFEGVLKCYLHETLETIINRLVEAEVH 307
            |:||:||.:.:|.|   |.||::|.:||..:|.     ..|.|:....:|:....:|.||:..||
 Worm   266 DMYSRFDAVGIALE---NRLDITVKEALAFKSQGGPMKNDERVVSVRDNESFWKAVNVLVDHNVH 327

Human   308 RLVVVDENDVVKGIVSLSDILQALVLTGG 336
            ||..|:|:..::|::||||::..:|:..|
 Worm   328 RLCAVNEHGGIEGVISLSDVINFMVVQPG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRKAG1NP_001193638.1 CBS_euAMPK_gamma-like_repeat1 38..183 CDD:341388 56/162 (35%)
CBS repeat 45..127 CDD:341388 26/98 (27%)
CBS repeat 139..183 CDD:341388 22/43 (51%)
CBS_euAMPK_gamma-like_repeat2 209..332 CDD:341399 46/128 (36%)
CBS repeat 210..275 CDD:341399 25/65 (38%)
CBS repeat 286..329 CDD:341399 15/42 (36%)
aakg-2NP_510725.1 CBS_pair_SF 48..200 CDD:449531 56/163 (34%)
CBS repeat 56..143 CDD:341358 26/98 (27%)
CBS repeat 156..200 CDD:341358 22/43 (51%)
CBS_pair_SF 226..352 CDD:449531 46/128 (36%)
CBS repeat 227..290 CDD:341358 25/65 (38%)
CBS repeat 306..349 CDD:341358 15/42 (36%)

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