DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RADIL and MYO4

DIOPT Version :10

Sequence 1:NP_060529.4 Gene:RADIL / 55698 HGNCID:22226 Length:1075 Species:Homo sapiens
Sequence 2:NP_009373.1 Gene:MYO4 / 851204 SGDID:S000000027 Length:1471 Species:Saccharomyces cerevisiae


Alignment Length:308 Identity:62/308 - (20%)
Similarity:122/308 - (39%) Gaps:61/308 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   507 LFWMSNSIELLYFIQQKCPLYMQSMEEQLDITGSKESLFSCTLTASE-EAMAVLEEVVLYAFQQC 570
            :||:||...|..|...:..||..:..::      |:.|....|...| |.:.|.:::......:.
Yeast  1187 IFWLSNLSRLPAFAANQKTLYEANGGDE------KDKLTLIYLNDLENETLKVFDKIYSTWLVKF 1245

Human   571 VYYVSKSLYICLPALLECPPFQTERRESWSSAPELPEELRRVVSVYQAALDLLRQLQVHPEVASQ 635
            :.:.|..:.| ...:|....|:....|.::.......|...|:..:| .:|     .:|.::.:.
Yeast  1246 MKHASAHIEI-FDMVLNEKLFKNSGDEKFAKLFTFLNEFDAVLCKFQ-VVD-----SMHTKIFND 1303

Human   636 MLAYLFFFSGTLLLNQLLDRGPSLSCFHWPRGVQACARLQQLLEWMRSAGFGAAGEHFFQKL-SC 699
            .|.||    ..:|.|.|:.:.|:|   :|..|.:....:::|:.|            |..:: ..
Yeast  1304 TLKYL----NVMLFNDLITKCPAL---NWKYGYEVDRNIERLVSW------------FEPRIEDV 1349

Human   700 TLNLLATPRA-QLIQMSWTAL---RAAFP---ALSPAQLHRLLTHYQLASAMGPMSTWEPGAQDS 757
            ..||:...:| :::|:..:.|   :..|.   ||:|||:..:|..|:      |.:..|.|..: 
Yeast  1350 RPNLIQIIQAVKILQLKISNLNEFKLLFDFWYALNPAQIQAILLKYK------PANKGEAGVPN- 1407

Human   758 PEAFRSEDVLESYEN---PPPIVLPSDGFQVDLEANCLDDSIYQHLLY 802
                   ::|....|   ...:.||.   ::::..:...||...||.|
Yeast  1408 -------EILNYLANVIKRENLSLPG---KMEIMLSAQFDSAKNHLRY 1445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RADILNP_060529.4 RA_Radil_like 50..161 CDD:340636
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..237
FHA_RADIL 244..358 CDD:438785
Myo5p-like_CBD_Rasip1 414..779 CDD:271256 55/283 (19%)
PRK07764 <812..956 CDD:236090
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 872..967
PDZ_Radil-like 972..1059 CDD:467177
MYO4NP_009373.1 COG5022 2..1471 CDD:227355 62/308 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.