DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RADIL and didum

DIOPT Version :9

Sequence 1:NP_060529.4 Gene:RADIL / 55698 HGNCID:22226 Length:1075 Species:Homo sapiens
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:896 Identity:161/896 - (17%)
Similarity:296/896 - (33%) Gaps:260/896 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    16 KLKRQSQLLSSMLSRTLSYKYRDLDSTFSSL-----GASDDPAELSTQLSAPGVLKVFGDSVCT- 74
            ::|.:::.:|.|     ..||..|::...|:     ..:.|.:.|..:.|...|||:..:...| 
  Fly   923 RMKAEAKTISHM-----ENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEISVLKMKLELKKTL 982

Human    75 GTHYKSVLATGTSSARELVKEALERYALDPRQAGQYVLCDVVGQAGDAGQRWQARCFRVFGDSEK 139
            ...:|:|.|  ....::.:.|||.:.....|.....:|    .:.|.|.:.|         .|:|
  Fly   983 EAEFKNVKA--ACQDKDKLIEALNKQLEAERDEKMQLL----EENGHAQEEW---------ISQK 1032

Human   140 PLLIQELWKPREGLSRRFELRKRSDVEE-----------------------------------LA 169
            ....||..:.|..:....::.|.::|.:                                   :.
  Fly  1033 QTWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFML 1097

Human   170 AKEVDTITAG-INAQARRLQRSRAKGTPTPALGDARSS-----PPPRLRRTVS-ETSLSPVNALP 227
            .:|:..:||| .:..||:...:.::.........|:::     ||..|.:..| ..|.|.|..|.
  Fly  1098 KEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVVKLR 1162

Human   228 AAAQGPEE-----------------PGPDAMRYSLYQSPHLLLLQGYSQ-----QHDSLVYVLNR 270
            :..:..::                 |..|:.|.|..:..:..|...|.|     :|...:..||.
  Fly  1163 SILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIKHGVEINELNA 1227

Human   271 DRHTVGQRTPSSKPSISLSAPDILPLHCTIRRQPLPDSGQAAGRLVLEPIPGAHIS--VNFSEVG 333
             :|...|.....:....:....:|.......|...|:|.|..|..|.|.:...|..  :|.....
  Fly  1228 -QHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQMRGNDVNELMEAFHSQKLINRQLES 1291

Human   334 HRTVVL--HHGDLLSLGLYYLLLFKDPAQAQPLP--------------------------ARALA 370
            ....:.  |:..|:.:......|..:..:.|.:.                          .:|:|
  Fly  1292 ELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFEDSNVDTLRQNDRYLRRELQKAVA 1356

Human   371 RLRAVPQSCRLCGAALGA-----------------RGAASPTQAAL--------PRRQQLLLEFE 410
            :...|.:..:|..|.|.|                 |..::.|.|.:        .:..|.|::|.
  Fly  1357 QFLLVQEELKLANAKLKAYRQDGGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLMKFH 1421

Human   411 PHLEDTLLQRIMTLIEPGGDDHKLT--PAFLLCLCIQHSATHFQPGTFGQLLLKIARLIRETVWE 473
            ....|.:|||:::.:.|......|.  ||:|:.:||:::..........:||.|....|:     
  Fly  1422 SSDLDKILQRLLSALTPRTVVGLLPGFPAYLIFMCIRYTDLTNADDDVRELLSKFVIQIK----- 1481

Human   474 KTKELAEKQAQLQEPISLASCAMADLVPDLQPILFWMSNSIELLYFIQQKCPLYMQSMEEQLDIT 538
                   |..:...||              :..:.|:.|||.||..::|     ...::|.:...
  Fly  1482 -------KMHRTPHPI--------------ENRVIWLVNSITLLNLMKQ-----YGDVDEYVKFN 1520

Human   539 GSKESLFSCTLTASEEAMAVLEEVVLYAFQQCVYYVSKSLYICL-------------PALLECPP 590
            ..|::            ...|:...|:.:::.:..:..:||..|             ||:|....
  Fly  1521 TEKQN------------QQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDE 1573

Human   591 FQTERRE----------SWSSAPE---------LPEELRRVVSVYQ-AALDLLRQLQVHPEVASQ 635
            .|..|:.          ..||:||         |..:|......:| ..||..        .|.|
  Fly  1574 IQRGRQAHGMRSRATSIGASSSPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNC--------YAEQ 1630

Human   636 MLAYLFFFSGTLLLNQLLDRGPSLSCFHWPRGVQACARLQQLLEWMRSAGFGAAGEHFFQKLSCT 700
            :...|.:|...:.||.|:.||.  .|. |..|:.....:..:.:|:||           :|:|  
  Fly  1631 IFHQLLYFICAVALNCLMLRGD--ICM-WETGMIIRYNIGCIEDWVRS-----------KKMS-- 1679

Human   701 LNLLATPRAQLIQMSW-----------TALRAAFPALSPAQLHRLLTHYQL 740
             |.:.|..|.|.|:|.           ..:.....:||.||:.:::..|:|
  Fly  1680 -NDVLTALAPLNQVSQLLQSRKSEQDVQTICDLCTSLSTAQVLKVMKSYKL 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RADILNP_060529.4 RA 61..164 CDD:279168 21/103 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..237 11/76 (14%)
FHA 273..343 CDD:278899 13/73 (18%)
Myo5p-like_CBD_Rasip1 414..779 CDD:271256 75/373 (20%)
DUF4764 <809..935 CDD:292583
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 872..967
PDZ_signaling 974..1058 CDD:238492
didumNP_724569.1 MYSc 65..778 CDD:214580
MYSc_Myo5 84..767 CDD:276831
IQ 900..922 CDD:197470
GBP_C <971..1086 CDD:303769 22/129 (17%)
coiled coil 1049..1068 CDD:293879 2/18 (11%)
coiled coil 1077..1086 CDD:293879 0/8 (0%)
JAKMIP_CC3 <1190..1299 CDD:292653 21/109 (19%)
Myo5_CBD 1424..1792 CDD:271254 75/374 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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