DRSC/TRiP Functional Genomics Resources

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Protein Alignment KDM4D and kdm4aa

DIOPT Version :10

Sequence 1:NP_060509.2 Gene:KDM4D / 55693 HGNCID:25498 Length:523 Species:Homo sapiens
Sequence 2:NP_001429396.1 Gene:kdm4aa / 100003413 ZFINID:ZDB-GENE-110609-4 Length:2012 Species:Danio rerio


Alignment Length:358 Identity:226/358 - (63%)
Similarity:290/358 - (81%) Gaps:1/358 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     6 SKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYDNISEIL 70
            |.:..:|:|...||.||||||||.||::||||||||||||||:||::|||:||.|.|||:|.:::
Zfish     5 SVSQSSQSPATRIMTFHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRRTYDDIEDLV 69

Human    71 IATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDLERKYWKNRIYNSPI 135
            |.||:|||.:|::|:||||:.:||.|||.|:|..||:.|:..|.:.:||:||||:|||..:|.|:
Zfish    70 IPTPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTANTDKFSNPRYADFEELERKFWKNLTFNPPL 134

Human   136 YGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYS 200
            ||||:||:|:|.:..:||:|.|.||.|::|:|.|:.|:|||||||||||||:|||||||||||||
Zfish   135 YGADVSGTLYDPDVMEWNIGRLNTILDMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYS 199

Human   201 INYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRIT 265
            |||||.||||:|||||||||:||||||:..||||::.|.||||||:.||||::|::.||||.::|
Zfish   200 INYLHFGEPKSWYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILRKYGIPFEKVT 264

Human   266 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFSMDAFVRILQP 330
            ||||:|:|||||||||||||||||||:.||||.|||||||:|:.|||.:..|..|||.||...||
Zfish   265 QEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLATLCSCRKDMVKISMDVFVHKFQP 329

Human   331 ERYDLWKRGQDRAVVDHMEPRVPASQELSTQKE 363
            |||.|||.|:|...:||.:| .|...|:..:.|
Zfish   330 ERYKLWKAGKDNVPIDHSKP-TPEVAEIQKENE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KDM4DNP_060509.2 JmjN 18..58 CDD:128818 31/39 (79%)
JmjC 179..295 CDD:396791 90/115 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..523
kdm4aaNP_001429396.1 None
Blue background indicates that the domain is not in the aligned region.

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