DRSC/TRiP Functional Genomics Resources

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Protein Alignment znrf3 and mura

DIOPT Version :9

Sequence 1:NP_001295484.1 Gene:znrf3 / 556813 ZFINID:ZDB-GENE-070705-263 Length:866 Species:Danio rerio
Sequence 2:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster


Alignment Length:104 Identity:30/104 - (28%)
Similarity:49/104 - (47%) Gaps:14/104 - (13%)


- Green bases have known domain annotations that are detailed below.


Zfish   212 IKLKQRRSQSSMNRMAIQALEKMETCKFKAKFKGQREASCGASDSVSSSSTSDCAICLEKYIDGE 276
            :.|.:|..::....:....::::.:.||              :..|.:...|.|.:|:..:...:
  Fly  1038 LSLAERLGEAKPRGLTRNEIDQLPSYKF--------------NPEVHNGDQSSCVVCMCDFELRQ 1088

Zfish   277 ELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNIIDQKKG 315
            .|||:||:|.||.||||.||..:.|||.||.|..|...|
  Fly  1089 LLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASDYFDG 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
znrf3NP_001295484.1 zf-RING_2 265..306 CDD:290367 19/40 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 790..811
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 19/41 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R768
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.950

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