Sequence 1: | NP_001295484.1 | Gene: | znrf3 / 556813 | ZFINID: | ZDB-GENE-070705-263 | Length: | 866 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_499473.2 | Gene: | plr-1 / 176575 | WormBaseID: | WBGene00023404 | Length: | 487 | Species: | Caenorhabditis elegans |
Alignment Length: | 464 | Identity: | 117/464 - (25%) |
---|---|---|---|
Similarity: | 192/464 - (41%) | Gaps: | 100/464 - (21%) |
- Green bases have known domain annotations that are detailed below.
Zfish 26 SVLAKDTAFVE---VVLFESSPNGDYT--TYTTGLQGRFSRAGATISAEGEIVQMHPLGLCN--- 82
Zfish 83 NNDEEDLYEYGWVGVVKLEQPE-LDPSCLTVLGKAKRAVQRGATAVIFDVSENPDAIDQLNQVSE 146
Zfish 147 DPLKRPVVYV--KGTDAVK--LMNIVNKQKVARARIQHRPPRPTEYFDMGIF--------LAFFV 199
Zfish 200 VVSLVCLILLIKIKLKQRRSQSSMNR------MAIQALEKMETCKFK-----------------A 241
Zfish 242 KFKGQREASC---------GASDSVSSSSTSD----CAICLEKYIDGEELRVIPCAHRFHKKCVD 293
Zfish 294 PWLLQHHTCPHCRHNIIDQKKGNPGAVCLDPGNPVHGRQQRV--VLPVHYPGRVHRAGQVTAYPT 356
Zfish 357 RTSMDPHGNPITVLTVDQHPEQGLYPSQSSFIRGYPALHLDHTLNPHHCGLEHRGPAYPQTHTF- 420
Zfish 421 KRPKFHGRN 429 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
znrf3 | NP_001295484.1 | zf-RING_2 | 265..306 | CDD:290367 | 25/40 (63%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 790..811 | ||||
plr-1 | NP_499473.2 | zf-rbx1 | 305..358 | CDD:289448 | 28/52 (54%) |
zf-RING_2 | 317..357 | CDD:290367 | 25/39 (64%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D138786at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto15676 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R768 |
SonicParanoid | 1 | 1.000 | - | - | X4852 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.950 |