DRSC/TRiP Functional Genomics Resources

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Protein Alignment RUFY2 and VPS27

DIOPT Version :10

Sequence 1:NP_060457.4 Gene:RUFY2 / 55680 HGNCID:19761 Length:641 Species:Homo sapiens
Sequence 2:NP_014403.3 Gene:VPS27 / 855739 SGDID:S000005289 Length:622 Species:Saccharomyces cerevisiae


Alignment Length:234 Identity:65/234 - (27%)
Similarity:109/234 - (46%) Gaps:54/234 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   433 QLEQRLQQAEKAQMEAEDEDEKYLQECLSKSDSLQ-KQISQKE------KQLVQLETDLKIE-KE 489
            :|:..::||....:...|.|   |...|..||.|: ::::.|:      |:::....:...: ..
Yeast     8 ELDALIEQATSESIPNGDLD---LPIALEISDVLRSRRVNPKDSMRCIKKRILNTADNPNTQLSS 69

Human   490 WRQT-----------LQEDLQKE-KDALSH--LRNETQQIIS------LKKEFLNLQDENQ--QL 532
            |:.|           ::|...:| .|.:.|  ||.::.:.:|      |.:.::..::::|  .:
Yeast    70 WKLTNICVKNGGTPFIKEICSREFMDTMEHVILREDSNEELSELVKTILYELYVAFKNDSQLNYV 134

Human   533 KKIYHEQEQALQELGNK------LSESKLKIEDIKEANKALQGLVWLKDKEATHCKLCEKEFSLS 591
            .|:|.:    |...|.|      ||.|...:.|.|....      |: |.:|  |.:|.|:|||.
Yeast   135 AKVYDK----LISRGIKFPEKLTLSNSPTAMFDSKTPAD------WI-DSDA--CMICSKKFSLL 186

Human   592 KRKHHCRNCGEIFCNACSDNELPLPSSP--KPVRVCDSC 628
            .||||||:||.:||...|.|.:|||...  :||||||||
Yeast   187 NRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSC 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUFY2NP_060457.4 RUN_RUFY2 45..200 CDD:439057
Smc <301..>570 CDD:440809 33/172 (19%)
FYVE_RUFY2 569..639 CDD:277298 32/62 (52%)
VPS27NP_014403.3 VHS_Vps27 7..149 CDD:340776 28/147 (19%)
FYVE_like_SF 169..226 CDD:333710 32/66 (48%)
GAT_Vps27 349..432 CDD:410590
Blue background indicates that the domain is not in the aligned region.

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