DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lrrc4ba and Fili

DIOPT Version :9

Sequence 1:XP_021329717.1 Gene:lrrc4ba / 556747 ZFINID:ZDB-GENE-080327-25 Length:729 Species:Danio rerio
Sequence 2:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lrrc4baXP_021329717.1 LRR <60..280 CDD:227223
leucine-rich repeat 71..94 CDD:275380
leucine-rich repeat 95..118 CDD:275380
leucine-rich repeat 119..142 CDD:275380
leucine-rich repeat 143..166 CDD:275380
leucine-rich repeat 167..191 CDD:275380
leucine-rich repeat 192..213 CDD:275380
leucine-rich repeat 214..237 CDD:275380
leucine-rich repeat 238..261 CDD:275380
leucine-rich repeat 262..283 CDD:275380
TPKR_C2 294..344 CDD:326558
I-set 347..436 CDD:333254
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378
leucine-rich repeat 98..121 CDD:275380
LRR_8 120..180 CDD:404697
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
LRR <161..>354 CDD:227223
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
leucine-rich repeat 218..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
LRR_8 337..397 CDD:404697
leucine-rich repeat 339..360 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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