DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ctnnd1 and p120ctn

DIOPT Version :9

Sequence 1:XP_021332609.1 Gene:ctnnd1 / 556726 ZFINID:ZDB-GENE-110208-9 Length:950 Species:Danio rerio
Sequence 2:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster


Alignment Length:765 Identity:260/765 - (33%)
Similarity:371/765 - (48%) Gaps:152/765 - (19%)


- Green bases have known domain annotations that are detailed below.


Zfish   224 THSRPQL----DPYSAQPQVGRMG-----SAVEISALQRFVPEPYGL--------EDDQRSLGYD 271
            ||....|    :|.:.|.|.|...     ||...|:...::.:|.|:        ...|..:..:
  Fly    18 THINMDLSLTHEPANMQSQFGSFQNYDQFSAAGYSSTPLYITKPTGVGAITKVAPHCSQNKIETN 82

Zfish   272 EPDYGMGPAMHYSTMPRLAHPHHAPPPR--RTGSYEGTLDGDMSG-------------------A 315
            ..|         :::|.:.:...|...|  :.|.||.|.:..::|                   .
  Fly    83 STD---------NSIPDIENHPLATTVRYVQAGQYEDTSEYGVAGLTCGIDSEYTAEAVVPYCYT 138

Zfish   316 GDMFYWG-----------GGAPLAQGERGSMASLDSTLR--------KGP--------------- 346
            .|..|.|           .|.|......|:.|..||..|        |.|               
  Fly   139 SDANYTGIQNTTSSIKPFSGRPFNDNINGAEAVADSQCRTFKSSAEFKLPQFAMSSINTVPQRLE 203

Zfish   347 --------------APTAWRQPELPEVIAMLNYRLDPVKSNAAAYLQHLTFKNDKVKSEVRRLKG 397
                          :...||.|.|.|||:.|:.....:|:|||||||||.:.:|..|...|.|.|
  Fly   204 EKDDYIEGSENDICSTMRWRDPNLSEVISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGG 268

Zfish   398 IPALVSMLDNPKKEVHYAACGALKNISYGRDPD-NKIAIKNCDGIPALVRLLRKTRDQDLTDTIT 461
            ||.||.:|.....|:|..|||||:|:||||..| ||..|||..||.|||.||.::::.::.:.:|
  Fly   269 IPPLVRLLSYDSPEIHKNACGALRNLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVT 333

Zfish   462 GTLWNLSSHDSVKMEIVDHALHALSDEVMVPHSGWERGNEGGEESCKPRHLEWETALTNTTGCLR 526
            |.|||:||.:.:|..|:|.||.|:...|:.|||||:....|  |:|      :.|...|.:|.||
  Fly   334 GVLWNMSSCEDLKRSIIDEALVAVVCSVIKPHSGWDAVCCG--ETC------FSTVFRNASGVLR 390

Zfish   527 NVSSERSEARRKLRECSGLVDSLMYIVQSQINCKDVDNKLIENSVCLLRNLSYQVHR-EIPGCER 590
            ||||....||..||.|..||:.|:|:|::.|...::.||.:||.||:||||||:... :.|..::
  Fly   391 NVSSAGEHARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLSYRCQEVDDPNYDK 455

Zfish   591 YLESIPVNQGPLPSQKG---GCFSSRKGKDEWFSKGKREDDGTSDTI-------DIPKRTTP--- 642
            :....|....| .|.||   |||.:.|         |:::...||.:       |..|.:..   
  Fly   456 HPFITPERVIP-SSSKGENLGCFGTNK---------KKKEANNSDALNEYNISADYSKSSVTYNK 510

Zfish   643 -AKGYELLFQPEVVRVYTSLLKESKNPSVLEAAAGAVQNLCAGRWTYGRYIRATMRQEHGLPMMT 706
             .||||.|:|||||:.|.|||:...||..|||||||:|||.|..|.....||||:|:|.|||::.
  Fly   511 LNKGYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPSIDIRATVRKEKGLPILV 575

Zfish   707 ELLSHGNDRVVRAMSGALRNLAIDARNRELLGKHAVPNLVANLPGGGQSQPARALSEETVVSVLS 771
            |||....||||.|::.||||||||.||:||:||:|:.:||..|| .|..|..:..|::|:.:||:
  Fly   576 ELLRMEVDRVVCAVATALRNLAIDQRNKELIGKYAMRDLVQKLP-SGNVQHDQNTSDDTITAVLA 639

Zfish   772 TMAEVVGSSVDAAKTLRSAQGIERLVLINKDSNR-SDREVRGAGLVLQIVWGFKELRRTLEKDGW 835
            |:.||:..:.:.:::|..:.||:||:.|.|...: :...::.|..||..:|...|||...:|:||
  Fly   640 TINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEKYTSCVLKFASQVLYTMWQHNELRDVYKKNGW 704

Zfish   836 KKTDFM----------------VN--LNPPNNTRSNGGYEESTLPLIDRG 867
            |:.||:                ||  ||.|..::....||:.|   |.||
  Fly   705 KEQDFVSKHFTAHNTPPSSPNNVNNTLNRPMASQGRTRYEDRT---IQRG 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctnnd1XP_021332609.1 armadillo repeat 356..381 CDD:293788 13/24 (54%)
Arm 385..424 CDD:278915 18/38 (47%)
armadillo repeat 389..425 CDD:293788 17/35 (49%)
ARM 428..469 CDD:214547 18/41 (44%)
armadillo repeat 432..467 CDD:293788 15/34 (44%)
armadillo repeat 474..528 CDD:293788 20/53 (38%)
armadillo repeat 646..683 CDD:293788 24/36 (67%)
Arm 647..683 CDD:278915 23/35 (66%)
ARM 693..728 CDD:214547 20/34 (59%)
armadillo repeat 693..727 CDD:293788 19/33 (58%)
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 55/113 (49%)
armadillo repeat 227..252 CDD:293788 13/24 (54%)
armadillo repeat 260..296 CDD:293788 17/35 (49%)
armadillo repeat 304..339 CDD:293788 15/34 (44%)
ARM 307..442 CDD:237987 61/142 (43%)
armadillo repeat 347..392 CDD:293788 19/52 (37%)
armadillo repeat 515..556 CDD:293788 25/40 (63%)
ARM 516..643 CDD:237987 68/127 (54%)
armadillo repeat 562..596 CDD:293788 19/33 (58%)
armadillo repeat 601..641 CDD:293788 17/40 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583610
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1048
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 430 1.000 Inparanoid score I1698
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125744at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10372
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X765
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.900

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