DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NHP2 and NHP2

DIOPT Version :10

Sequence 1:NP_001383039.1 Gene:NHP2 / 55651 HGNCID:14377 Length:168 Species:Homo sapiens
Sequence 2:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster


Alignment Length:127 Identity:48/127 - (37%)
Similarity:77/127 - (60%) Gaps:7/127 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTKIKADPDGPEAQAEACSG------ERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQ 59
            |.|:|.:......::...||      |.:|.:.|:..|.||:|:|.::|.:|.||.:|||:|.|.
  Fly     1 MGKVKVERSEDADESVVASGDVTIKEEESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKT 65

Human    60 -IRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTFPSCKVGI 120
             :|.|:|:||..:.|||.||.:.|||..|:::.||||.:||::.:||.|.||:......:|:
  Fly    66 FLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGV 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_001383039.1 SNU13 32..>112 CDD:455736 39/80 (49%)
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 31/71 (44%)

Return to query results.
Submit another query.