DRSC/TRiP Functional Genomics Resources

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Protein Alignment csk and Src42A

DIOPT Version :9

Sequence 1:NP_001071067.1 Gene:csk / 556454 ZFINID:ZDB-GENE-061103-493 Length:450 Species:Danio rerio
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:380 Identity:158/380 - (41%)
Similarity:230/380 - (60%) Gaps:16/380 - (4%)


- Green bases have known domain annotations that are detailed below.


Zfish    82 WFHGKITREQAERLLYPPET--GLFLVRESTNYPGDYTLCVSCDGKVEHYRI-IYHNGKLSIDEE 143
            |:..||.|.:||:.|..||.  |.||:|:|.:...||:|.|.....|:|||| ....|...|...
  Fly  1210 WYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARR 1274

Zfish   144 EYFENLMQLMEHYTKDADGLCTRLIKP--KIMEGTVAAQDEFSRSGWALNRKELKLIQTIGKGEF 206
            ..|..|.:|:|||:||:||||..|.||  :|.:.........:|..|.::|..||.::.:|.|:|
  Fly  1275 TTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQF 1339

Zfish   207 GDVMVGDYRG-KKVAVKCIKHDA-TAQAFVAEASVMTQLRHNNLVQLLGVIVEEKGSLYIVTEYM 269
            |||..|.:.. ..||:|.:|... ..:.|:|||.:|.:|||..|:||..|...|: .:||:||.|
  Fly  1340 GDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEE-PIYIITELM 1403

Zfish   270 AKGSLVDYLRS---RGRTVIGGDRLINFSMDVCKAMEYLEANNFVHRDLAARNVLVSEDNIAKVS 331
            ..|||::||::   :||: :....||:.:..:...|.|||:.|::|||||||||||.:.||.|::
  Fly  1404 KHGSLLEYLQAIAGKGRS-LKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIA 1467

Zfish   332 DFGLTK----EASSTQDTAKLPVKWTSPEALREKKFSTKSDVWSYGILLWEIYSFGRVPYPRIPL 392
            ||||.:    :....:..|:.|:|||:|||....|||.||||||:||||.|:.::||:|||.:..
  Fly  1468 DFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTN 1532

Zfish   393 KEVVPRVEKGYKMDSPDGCPPVVYDIMKQCWTLDAVVRPSFRDLREKLQDIITNE 447
            .||:.:||.||:|..|..|.|.:|:||.:||..|.:.||:|..|:.||:|..|::
  Fly  1533 AEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSD 1587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cskNP_001071067.1 SH3_CSK 11..67 CDD:212703
SH2_csk_like 78..175 CDD:198190 41/97 (42%)
PTKc_Csk 188..443 CDD:133213 114/263 (43%)
STYKc 195..440 CDD:214568 110/253 (43%)
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 38/90 (42%)
PTKc_Frk_like 1319..1587 CDD:270653 116/269 (43%)
Pkinase_Tyr 1328..1580 CDD:285015 110/253 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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