DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KIF21A and pof1

DIOPT Version :9

Sequence 1:NP_001365368.1 Gene:KIF21A / 55605 HGNCID:19349 Length:1675 Species:Homo sapiens
Sequence 2:NP_593310.1 Gene:pof1 / 2542914 PomBaseID:SPAC57A10.05c Length:605 Species:Schizosaccharomyces pombe


Alignment Length:464 Identity:113/464 - (24%)
Similarity:191/464 - (41%) Gaps:113/464 - (24%)


- Green bases have known domain annotations that are detailed below.


Human  1216 GLPSKIGSISRQSSLSEKKIPEPSPVTRRKAYEKAEKSKAKEQKHSDSGTSEASLS--PPSSPPS 1278
            |||           |.|:.....:..:.:|.||:..| :..:|.|..|...:|.|.  |.||   
pombe   168 GLP-----------LLERNTLYAAKASIQKRYERLTK-RGVDQAHESSPVKKAKLDDYPTSS--- 217

Human  1279 RPRNELNVFNRLTVSQGNTSVQQDKSDESDSSL---------SEVHSRSSRRGIINPFPASKGIR 1334
                     |..|:|    || :..|..|||..         .||::...|              
pombe   218 ---------NEETIS----SV-KPPSPNSDSKFFLPFKTRPWKEVYAERCR-------------- 254

Human  1335 AFPLQC--IH------IAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMSLGGHPNNV 1391
               ::|  .|      :..||:..|:|:....::|.:||.|.|.::|||.|.|::..|.||.:.|
pombe   255 ---VECNWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV 316

Human  1392 VSVKYCNYTSLVFTVSTSYIKVWDIRDSAKCIRTLTSSGQVTLGDACSASTSRTVAIPSGENQIN 1456
            ..::: :...|:.......|::|:.|                        ||..::|..|... :
pombe   317 TCLQF-DQCKLISGSMDKTIRIWNYR------------------------TSECISILHGHTD-S 355

Human  1457 QIALNPTGTFLYAASGN-AVRMWDLKRFQSTGK---LTGHLGPVMCLTVDQISSGQDLIITGSKD 1517
            .:.|....|.|.:.|.: .|::|..    |.||   |.||.|||..:   :|...:.|:::||.|
pombe   356 VLCLTFDSTLLVSGSADCTVKLWHF----SGGKRITLRGHTGPVNSV---RIIRDRGLVLSGSDD 413

Human  1518 HYIKMFDVTEGALGTVSPTHNFEPPHYDGIEALTIQGDNLFSGSRDNGIKKWDLTQKDLLQQVPN 1582
            ..||::     :|.|.:..|.|. .|...:::|.:....|||.|.|..||:||:.:|..:..: .
pombe   414 STIKIW-----SLETNTCLHTFS-AHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTL-F 471

Human  1583 AHKDWVCALGVVPDHPVLLSGCRGGILKVWNMDTFMPVGEMKGHDSPINAICVNSTHIFTAADDR 1647
            .|.:.|..  :..||..|:||...|::|||  :....|..:|.|..|:.::.:....:.:.::|.
pombe   472 GHIEGVWE--IAADHLRLISGAHDGVVKVW--EACECVHTLKNHSEPVTSVALGDCEVVSGSEDG 532

Human  1648 TVRIWKARN 1656
            .:.:|...|
pombe   533 KIYLWLFNN 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KIF21ANP_001365368.1 KISc_KIF4 8..372 CDD:276823
Cast <364..836 CDD:401982
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..641
Smc <644..1004 CDD:224117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 779..804
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 841..881
Rcc_KIF21A 936..1017 CDD:410204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1138
Interaction with KANK1 and KANK2. /evidence=ECO:0000269|PubMed:29183992 1146..1167
WD40 1340..1653 CDD:238121 82/324 (25%)
WD 1 1346..1383 14/36 (39%)
WD 2 1386..1424 7/37 (19%)
WD40 repeat 1391..1450 CDD:293791 8/58 (14%)
WD 3 1450..1488 8/38 (21%)
WD40 repeat 1456..1491 CDD:293791 10/38 (26%)
WD 4 1491..1533 13/41 (32%)
WD40 repeat 1496..1540 CDD:293791 11/43 (26%)
WD 5 1542..1579 12/36 (33%)
WD40 repeat 1548..1581 CDD:293791 11/32 (34%)
WD 6 1583..1622 12/38 (32%)
WD40 repeat 1588..1624 CDD:293791 11/35 (31%)
WD 7 1625..1662 5/32 (16%)
pof1NP_593310.1 F-box-like 110..156 CDD:289689
WD40 <258..564 CDD:225201 83/328 (25%)
WD40 268..537 CDD:238121 80/312 (26%)
WD40 repeat 317..351 CDD:293791 7/58 (12%)
WD40 repeat 356..389 CDD:293791 9/36 (25%)
WD40 repeat 396..431 CDD:293791 10/42 (24%)
WD40 repeat 437..471 CDD:293791 11/34 (32%)
WD40 repeat 477..512 CDD:293791 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.