DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDC42BPG and cdc42bpa

DIOPT Version :9

Sequence 1:XP_011543457.1 Gene:CDC42BPG / 55561 HGNCID:29829 Length:1569 Species:Homo sapiens
Sequence 2:XP_031758436.1 Gene:cdc42bpa / 100497067 XenbaseID:XB-GENE-6037508 Length:1829 Species:Xenopus tropicalis


Alignment Length:1859 Identity:779/1859 - (41%)
Similarity:1075/1859 - (57%) Gaps:332/1859 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 ERRLRALEQLA-RGEA-GGCPGLDGLLDLLLALHHELSSGPLRRERSVAQFLSWASPFVSKVKEL 64
            |.|||.||||. .|.. ||...::.|||.||.|:.|.|:.||||::.:..::.||.||..|||::
 Frog     4 EVRLRQLEQLVLNGPGRGGSLSVESLLDSLLCLYDECSASPLRRDKHINDYIQWAKPFALKVKQM 68

Human    65 RLQRDDFEILKVIGRGAFGEVTVVRQRDTGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSR 129
            ||.::||||||||||||||||.||:.::..::||||:|:|||||||||||||||||||||.|||:
 Frog    69 RLHKEDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSQ 133

Human   130 WVTTLHYAFQDEEYLYLVMDYYAGGDLLTLLSRFEDRLPPELAQFYLAEMVLAIHSLHQLGYVHR 194
            |:|||||||||:..||||||||.|||||||||:||||||.::::||||||||||.|:|||.||||
 Frog   134 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEDMSRFYLAEMVLAIDSVHQLHYVHR 198

Human   195 DVKPDNVLLDVNGHIRLADFGSCLRLNTNGMVDSSVAVGTPDYISPEILQAMEEGKGHYGPQCDW 259
            |:||||:|||:|||||||||||||:|..:|.|.||||||||||||||||||||:|||.|||:|||
 Frog   199 DIKPDNILLDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDW 263

Human   260 WSLGVCAYELLFGETPFYAESLVETYGKIMNHEDHLQFPPDVPDVPASAQDLIRQLLCRQEERLG 324
            ||||||.||:|:||||||||||||||||||||::..|||..:.||..:|:||||:|:|.:|.|||
 Frog   264 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQLADVSENAKDLIRRLICSREHRLG 328

Human   325 RGGLDDFRNHPFFEGVDWERLASSTAPYIPELRGPMDTSNFDVDDDTL---------NHP----- 375
            :.|::||:|||||.|:||:.:.:..||||||:..|.||||||||||.|         :||     
 Frog   329 QNGIEDFKNHPFFVGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNCTGASVPSHPYSIDL 393

Human   376 ---------------------GTLPPPSHGAFSGHHLPFVGFTYTS------------GSHSPES 407
                                 .|:|||:|..|||||||||||||||            .|.:|.:
 Frog   394 APDLQAEGLTEPSPNGQHPVAETMPPPTHTGFSGHHLPFVGFTYTSNCVLSDRSSLRDASGTPST 458

Human   408 -----------SSEAWAALERKLQCLEQEKVELSRKHQEAL-------HAPTD-------HRELE 447
                       .|.|..|.||:::.||||||||:||.||:.       |:..|       ..|::
 Frog   459 DLDANVQRSLEDSLATEAYERRIRRLEQEKVELTRKLQESTQAVQALQHSAVDGPVTASKDLEIK 523

Human   448 QLRKEVQTLR------DRLPEMLRDKASLSQTDGPPAGS-----PGQDSDLRQELDRLHRELAEG 501
            .|::|:..|:      ::|.:.| ||:.|::.|......     ..|...|:||.:.|:::|.|.
 Frog   524 SLKEELDKLKTLGTGANQLTQQL-DKSGLARPDFEEFSRQIRVFEKQVKVLKQEKEDLNKDLVES 587

Human   502 RAGLQAQEQELCRAQGQQEELLQRLQEAQEREAATASQ----TRALSSQLEEARA---------- 552
            ...::.|.:||..||.|:::.||.:.|..||.....||    .|.|..:.||..|          
 Frog   588 NEKMKTQTKELKEAQSQRKQALQEMAELNERLTELRSQKQKFVRQLRDKEEEMEAVAQKLEGLRQ 652

Human   553 -------AQRELEAQVSSLSRQVTQLQGQWEQRLEESSQAKTIHTASETNGM-----GPPEG--- 602
                   |::|||||:.|.:.:.::     :::|.|.|:..|....||..|:     |.|.|   
 Frog   653 DLRRVERAKKELEAQMDSAASEASK-----DRKLREKSEQYTKQLESELEGLKLKQVGRPLGVSN 712

Human   603 ----------------------------------------------GPQEAQLRKEVAALREQLE 621
                                                          ..|:..|.||:..|:::|:
 Frog   713 SEHQQEIAKLKTDLEKKSVFYEEEFAKREALHAGEIKNLKKELRDAESQQLNLNKEILVLKDKLD 777

Human   622 QAHSHRPSGKEEALCQ-----------LQEENRRLSREQERLEAELAQEQESKQRLEGE------ 669
            :......|.:||...:           |.|||::||.|.::|.|...:...:.:.||.|      
 Frog   778 KTRRESQSEREEFEAEMKQKFDRERLLLMEENKKLSSELDKLSAMFEKLSVNNRHLEEEMRDLAD 842

Human   670 RRETESNWEAQLADILSWVNDEKVSRGYLQALATKMAEELESLRNVGTQTLPARPLDHQWKARRL 734
            ::|:.::||||:.:|:.||:|||.:||||||||:||.|||::|||   .:|.|:|.|..||.||.
 Frog   843 KKESVAHWEAQITEIIQWVSDEKDARGYLQALASKMTEELDTLRN---SSLGAKPTDMPWKMRRF 904

Human   735 QKMEASARLELQSALEAEIRAKQGLQERLTQVQEAQLQAERRLQEAEKQSQALQQELAMLR---E 796
            .|::.||||||||||:|||||||.:||.|.:.:.|.:..|.:|||::|::|.|..|:..|:   :
 Frog   905 AKLDMSARLELQSALDAEIRAKQAIQEELNKAKAAIIATECKLQESDKKNQDLTTEIEKLKWETD 969

Human   797 ELRA-RGPVDTKPSNSLIPFLSFRSS-----EKDSAKDPGISGE----------ATRHGGEPDLR 845
            |||: :|....:..||.:.||:..:|     |:..:.:|...|.          :.....:.|::
 Frog   970 ELRSEKGVKHQESQNSFLAFLNAPTSVLDHFERSPSSNPASKGRRMDSVDNFTLSNTPSRDEDVK 1034

Human   846 PEG----RRSLRMGAVFP---------RAPTANTASTEGLPAKGWGMGPWEALGNGCPPPQPGSH 897
            .:|    |....|..:.|         :.||...:..                .:|...|:|.:|
 Frog  1035 SQGPSRSRSPSTMSDIEPPEVTDHRSIQTPTIRASYH----------------NSGSSAPKPKAH 1083

Human   898 TLRPRSFPSPTKCLRCTSLMLGLGRQGLGCDACGYFCHTTCAPQAPP-CPVPPDLLRTALGVHPE 961
            ....::|.:||||.:|||||:||.|||..|:.||:.||.|||.:||. ||:|.|..:..||:.|:
 Frog  1084 QFVVKTFNAPTKCNQCTSLMVGLIRQGCTCEVCGFSCHVTCADKAPAVCPIPTDQTKGPLGIDPQ 1148

Human   962 TGTGTAYEGFLSVPRPSGVRRGWQRVFAALSDSRLLLFDAPDLRLSPPSGALLQVLDLRDPQFSA 1026
            .|.||||||.:.||:|:||::||||..|.:.|.:|.|::..:.:.|..|..:.||:|:||.:|:.
 Frog  1149 KGIGTAYEGHVKVPKPAGVKKGWQRAMAVVCDFKLFLYEIAEGKSSQTSCVVSQVIDMRDEEFAV 1213

Human  1027 TPVLASDVIHAQSRDLPRIFRVTTSQLAVPPTTCTVLLLAESEGERERWLQVLGELQRLLLDARP 1091
            :.|||||||||..:|:|.|||||.|||:.....|::||||:||.|:.:|:.||.||.|:|...:.
 Frog  1214 SSVLASDVIHANRKDIPCIFRVTASQLSASSNKCSILLLADSESEKGKWVGVLNELHRILKKNKL 1278

Human  1092 RPRPVYTLKEAYDNGLPLLPHTLCAAILDQDRLALGTEEGLFVIHLRSNDIFQVGECRRVQQLTL 1156
            :.|.||..|||||:.|||:.:|..|||||.:|:|||.||||||:|:..::|.:||:.::|.|:.|
 Frog  1279 KDRSVYVPKEAYDSTLPLIKNTQSAAILDHERIALGNEEGLFVVHVTKDEIIRVGDNKKVHQVEL 1343

Human  1157 SPSAGLLVVLCGRGPSVRLFALAELENIEVAGAKIPESRGCQVLAAGSILQARTPVLCVAVKRQV 1221
            .||..|:.|:.||...|||:.:..|:..|....|:.|::|||.:.:|.:.......|||::||||
 Frog  1344 IPSEQLIAVISGRNRHVRLYPMISLDGRETEFYKLVETKGCQGIVSGQVRHGALTCLCVSMKRQV 1408

Human  1222 LCYQLGPGPGPWQRRIRELQAPATVQSLGLLGDRLCVGAAGGFALYPLLNEAAPLAL------GA 1280
            |||:|.... ...::|:|:|.|..||.:.:..:|||||...||..|||..:.:|.:|      ..
 Frog  1409 LCYELNQSK-TRHKKIKEIQVPGNVQWMAIFNERLCVGYQSGFMRYPLHADGSPYSLLHSDDHTL 1472

Human  1281 GLVPEELPPSRGGLGEALGAVELSLSEFLLLFTTAGIYVDGAGRKSRGHELLWPAAPMGWGYAAP 1345
            ..:.::..       :|:.|||:|..|:||.|::.|:|||..||:||..||:|||.|:...|.||
 Frog  1473 SFLTQQAT-------DAICAVEISNKEYLLCFSSVGVYVDCQGRRSRQQELMWPAGPLSCCYNAP 1530

Human  1346 YLTVFSENSIDVFDVRRAEWVQTVPLKKVRPLNPEGSLFLYGTEKVRLTYLRNQLAEKDEFDIPD 1410
            ||:|:|||::||||:...||:||:|||||||||.||||.:.|.|.:||.|.:|::||.||..:|:
 Frog  1531 YLSVYSENAVDVFDINSMEWIQTIPLKKVRPLNSEGSLNILGLETIRLIYFKNKMAEGDELVVPE 1595

Human  1411 LTDNSRRQLFRT-KSKRRFFFRVSEEQQKQQRREMLKDPFVRSKLISPPTNFNHLVHVGPANGRP 1474
            .:||||:|:.|. .:|||:.|||.||::.|||||||:||.:|:||||.||||||:.|:||.:|..
 Frog  1596 TSDNSRKQMVRNMNNKRRYSFRVPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGDGIQ 1660

Human  1475 GARD----KSPAPE----------------------------------------------EKGR- 1488
            ..:|    :||.|.                                              |.|| 
 Frog  1661 ILKDLPMPRSPYPSPLRQSSLISTPSNFEHVYHMTNLRQQDSRTMFSGSVSIPSITKSRMEPGRS 1725

Human  1489 VARGSG-PQRPHSFSEALRRPASMGSEGLGGDADPMKRKPWTSLSSESVS---CPQGSLSPATSL 1549
            ::..|| ..|......||||..|.||.|       .||:|..|.|..|:|   ..|||..||...
 Frog  1726 MSASSGLAARSSQNGSALRREVSGGSYG-------AKRQPMASPSDGSLSSGGLDQGSDVPARDF 1783

Human  1550 -MQVSERPR----------SLPLSP---------ELESS 1568
             .:.|:.||          |.|.||         .||||
 Frog  1784 EREDSDSPRHSTASNSSNLSSPPSPTSPHKTKSSSLESS 1822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC42BPGXP_011543457.1 STKc_DMPK_like 69..399 CDD:270748 244/364 (67%)
S_TKc 71..337 CDD:214567 201/265 (76%)
TPH 410..802 CDD:290579 160/512 (31%)
DMPK_coil 744..801 CDD:117396 29/60 (48%)
C1_1 897..>939 CDD:278556 22/41 (54%)
PH_MRCK 956..1088 CDD:269949 65/131 (50%)
CNH 1115..1378 CDD:279162 115/268 (43%)
cdc42bpaXP_031758436.1 PKc_like 4..445 CDD:419665 279/440 (63%)
SbcC <475..965 CDD:223496 155/498 (31%)
KELK 563..641 CDD:406277 24/77 (31%)
C1_MRCKalpha 1081..1140 CDD:410414 30/58 (52%)
PH_MRCK 1142..1276 CDD:269949 65/133 (49%)
CNH 1302..1566 CDD:395630 117/271 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D117302at33208
OrthoFinder 1 1.000 - - FOG0001346
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1218
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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