Protein Alignment RBM38 and Rbm38

DIOPT Version :9

• Sequence 1: NP_001278709.1
• Gene: RBM38 / 55544
• HGNCID: 15818
• Length: 271
• Species: Homo sapiens
• Sequence 2: NP_062420.2
• Gene: Rbm38 / 56190
• MGIID: 1889294
• Length: 237
• Species: Mus musculus
• Alignment Length: 271
• Identity: 226/271 - (83%)
• Similarity: 230/271 - (84%)
• Gaps: 34/271 - (12%)

Human     1 MLLQPAPCAPSAGFPRPLAAPGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 65
            |||||| |:||. ||||.|||.|||||||||||||||||||||||||||||||||||||||||||
Mouse     1 MLLQPA-CSPSV-FPRPSAAPSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 63

Human    66 ITDRQTGKSRGYGFGIIFVLEGHISQALNFDGRSWNPGGIFVGEPQVTMADRAAAERACKDPNPI 130
            ||||||||||||||                                |||||||||:|||||||||
Mouse    64 ITDRQTGKSRGYGF--------------------------------VTMADRAAADRACKDPNPI 96

Human   131 IDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPAAPVP 195
            |||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||.|||
Mouse    97 IDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPATPVP 161

Human   196 SLSSPYIEYTPASPAYAQYPPATYDQYPYAASPATAASFVGYSYPAAVPQALSAAAPAGTTFVQY 260
            ||||||:|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||||
Mouse   162 SLSSPYLEYTPASPAYAQYPPATYDQYPYAASPAAATSFVGYGYPAAVPQALSAAAPAGTTFVQY 226

Human   261 QAPQLQPDRMQ 271
            |||||||||||
Mouse   227 QAPQLQPDRMQ 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RBM38	NP_001278709.1	RRM_RBM24_RBM38_like	34..141	CDD:409818	73/106 (69%)
		PABP-1234	<46..269	CDD:130689	183/222 (82%)
Rbm38	NP_062420.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..24		18/24 (75%)
		RRM_RBM24_RBM38_like	32..107	CDD:240830	73/106 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C83966257
Domainoid	1	1.000	292	1.000	Domainoid score	I16685
eggNOG	0	0.000	Not matched by this tool.
HGNC	1	1.500	-	-
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H79543
Inparanoid	1	1.050	459	1.000	Inparanoid score	I12825
Isobase	0	0.000	Not matched by this tool.
NCBI	1	1.000	-	-
OMA	1	1.010	-	-		QHG40910
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001012
OrthoInspector	1	1.000	-	-		oto126297
orthoMCL	1	0.900	-	-		OOG6_105204
Panther	1	1.100	-	-	LDO	PTHR48024
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X602
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	14	14.400