DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STRADB and Stradb

DIOPT Version :9

Sequence 1:NP_061041.2 Gene:STRADB / 55437 HGNCID:13205 Length:418 Species:Homo sapiens
Sequence 2:NP_766244.4 Gene:Stradb / 227154 MGIID:2144047 Length:418 Species:Mus musculus


Alignment Length:418 Identity:380/418 - (90%)
Similarity:400/418 - (95%) Gaps:0/418 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSLLDCFCTSRTQVESLRPEKQSETSIHQYLVDEPTLSWSRPSTRASEVLCSTNVSHYELQVEIG 65
            ||||||||.|||:|||||||||||||||||||||..:|...||.|||||:|||:|||||||||||
Mouse     1 MSLLDCFCASRTRVESLRPEKQSETSIHQYLVDESAISRPPPSARASEVICSTDVSHYELQVEIG 65

Human    66 RGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLKALQKAVILSHFFRHPNITTYWTVFTVGS 130
            ||||||||||||||||||||||:||||||:|.||||||||:||||||||:|||||||||||||||
Mouse    66 RGFDNLTSVHLARHTPTGTLVTVKITNLESCTEERLKALQRAVILSHFFQHPNITTYWTVFTVGS 130

Human   131 WLWVISPFMAYGSASQLLRTYFPEGMSETLIRNILFGAVRGLNYLHQNGCIHRSIKASHILISGD 195
            |||||||||||||||||||||||:|||||||||||||||:||||||||||||||.||||||||||
Mouse   131 WLWVISPFMAYGSASQLLRTYFPDGMSETLIRNILFGAVQGLNYLHQNGCIHRSFKASHILISGD 195

Human   196 GLVTLSGLSHLHSLVKHGQRHRAVYDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACE 260
            ||||||||||||||:|||||||||:||||||||||||||||||||||||||||||||||||||||
Mouse   196 GLVTLSGLSHLHSLLKHGQRHRAVFDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACE 260

Human   261 LASGQVPFQDMHRTQMLLQKLKGPPYSPLDISIFPQSESRMKNSQSGVDSGIGESVLVSSGTHTV 325
            ||||||||||||||||||||||||||||||:||||||:|||:|||||||||||||||||:|||||
Mouse   261 LASGQVPFQDMHRTQMLLQKLKGPPYSPLDVSIFPQSDSRMRNSQSGVDSGIGESVLVSTGTHTV 325

Human   326 NSDRLHTPSSKTFSPAFFSLVQLCLQQDPEKRPSASSLLSHVFFKQMKEESQDSILSLLPPAYNK 390
            |||||||||:||||||||||||||||||||||||||||||||||||||||||||||.|||||||:
Mouse   326 NSDRLHTPSTKTFSPAFFSLVQLCLQQDPEKRPSASSLLSHVFFKQMKEESQDSILPLLPPAYNR 390

Human   391 PSISLPPVLPWTEPECDFPDEKDSYWEF 418
            ||.||.||.||:|.|..|||:||..|||
Mouse   391 PSASLQPVSPWSELEFQFPDDKDPVWEF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STRADBNP_061041.2 PK_STRAD_beta 59..386 CDD:270864 310/326 (95%)
StradbNP_766244.4 S_TKc 58..369 CDD:214567 295/310 (95%)
PK_STRAD_beta 59..386 CDD:270864 310/326 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83960309
Domainoid 1 1.000 614 1.000 Domainoid score I4921
eggNOG 1 0.900 - - E1_KOG0582
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10237
Inparanoid 1 1.050 781 1.000 Inparanoid score I8172
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG52849
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003031
OrthoInspector 1 1.000 - - oto122693
orthoMCL 1 0.900 - - OOG6_116602
Panther 1 1.100 - - LDO PTHR48014
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9028
SonicParanoid 1 1.000 - - X2021
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.290

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