DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIRPG and Sirpb1b

DIOPT Version :9

Sequence 1:NP_061026.2 Gene:SIRPG / 55423 HGNCID:15757 Length:387 Species:Homo sapiens
Sequence 2:XP_006530146.1 Gene:Sirpb1b / 668101 MGIID:3779828 Length:408 Species:Mus musculus


Alignment Length:402 Identity:220/402 - (54%)
Similarity:282/402 - (70%) Gaps:23/402 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     6 SWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGV 70
            :|.|.|...|||.||||| :.|...||::|||.|...|..|.:|||:|||||||||||:.|:|||
Mouse     6 AWTHIPHSVLLLILLLGL-KGAAMRELKVIQPVKSFFVGAGGSATLNCTVTSLLPVGPIRWYRGV 69

Human    71 GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPE-NVEFKS 134
            |..|.||.:....||||:|:|||:|||||:|||||||::||||.||||||||::||.| :.|.:|
Mouse    70 GQSRLLIQSFTGEHFPRITSVSDVTKRNNLDFSIRISNVTPADSGTYYCVKFQRGSSESDREIQS 134

Human   135 GPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPT 199
            |.|||:::.||||:|:|.|||||..|:.||:|||.||||.||::||||||||||:|..:|:|:|.
Mouse   135 GGGTELSVLAKPSSPMVSGPAARAVPKQTVTFTCRSHGFFPRNLTLKWFKNGNEISHLETSVEPE 199

Human   200 GQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRVPPTLEVTQQPMRVG 264
            ..||:|.:.||.:|||:|.|||||:||||.||||...||||.|::||.|:||||||::|||..|.
Mouse   200 ETSVSYRVSSTVQVVLEPRDVRSQIICEVDHVTLDRAPLRGIAHISEFIQVPPTLEISQQPTMVW 264

Human   265 NQVNVTCQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTYNWTSWFLVNISDQRDDVVLTC 329
            |.:.||||::||||...|:||.||||:.:||...||..||||||||.|..|||||...:::|:||
Mouse   265 NVIIVTCQIQKFYPPRFQVTWLENGNISRREVPFTLIVNKDGTYNWISCLLVNISALEENMVVTC 329

Human   330 QVKHDGQLAVSKRLALEVTVHQKDQSSDATPGPASSLTALLL-----------IAVLLGP----- 378
            ||:||||..|.:...:.||.||:.:.:..|.....:|..:|.           :|||||.     
Mouse   330 QVEHDGQAEVIETHTVVVTEHQRVKGTLQTTITEENLKNVLYELKTAGIAKIPVAVLLGSKILLL 394

Human   379 -----IYVPWKQ 385
                 ||:..||
Mouse   395 IAATVIYMHKKQ 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIRPGNP_061026.2 IgV_SIRP 33..143 CDD:319346 69/110 (63%)
IgC_SIRP_domain_2 145..248 CDD:319314 65/102 (64%)
IgC_SIRP_domain_3 250..353 CDD:319334 58/102 (57%)
Sirpb1bXP_006530146.1 Ig 32..143 CDD:386229 69/110 (63%)
IgC_SIRP_domain_2 145..248 CDD:319314 65/102 (64%)
IgC_SIRP_domain_3 250..352 CDD:319334 57/101 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83971945
Domainoid 1 1.000 146 1.000 Domainoid score I34754
eggNOG 1 0.900 - - E1_2BRY5
HGNC 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 449 1.000 Inparanoid score I12964
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG36121
OrthoDB 1 1.010 - - D114611at9347
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19971
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1115
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.870

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