DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIRPG and beat-Va

DIOPT Version :9

Sequence 1:NP_061026.2 Gene:SIRPG / 55423 HGNCID:15757 Length:387 Species:Homo sapiens
Sequence 2:NP_001189214.1 Gene:beat-Va / 41578 FlyBaseID:FBgn0038087 Length:300 Species:Drosophila melanogaster


Alignment Length:265 Identity:55/265 - (20%)
Similarity:90/265 - (33%) Gaps:64/265 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   164 VSFTCESHGFSPRDITL---KWFKNGNEL-------SDFQTNVDPTGQSVA----YSIRSTARVV 214
            |:.:|   .:..|..||   ||:|:..|.       |......|..|..|.    ....|:.|:.
  Fly    40 VTLSC---SYDMRGHTLNSVKWYKDHEEFFRYSPLTSPIYMTFDVAGLQVLEGKYVCNESSCRLD 101

Human   215 LDPWDVRSQVI--CEVAHVTLQGD----PLRGTANLSEAIRVP---PTLEVTQQPMRVGNQVNVT 270
            |.....:|..:  |||:     ||    .|...|:......:|   |.:|......|:...:..|
  Fly   102 LSLQGAKSTGLYKCEVS-----GDAPHFKLADKADNMTVAALPQNDPLIESFNSMYRMEEYLKAT 161

Human   271 CQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTYNW--------TSWFLVNISDQR----- 322
            | :..|.....:|||..||...........|:.....:::        ..:||   ..||     
  Fly   162 C-ISDFSSLPTRLTWYINGEQPLLGELYPTTDTSLAAHDYVLRRQRLQVQFFL---QGQRFFQAG 222

Human   323 DDVVLTCQVKHDGQLAVSKRLALEVTVHQKD--------QSSDATPGPA--------SSLTALLL 371
            ..:.|.|..:.:....:.:...|..::.|.|        :.::|..|.|        :||.:..|
  Fly   223 KILELKCVAEIENYPELRREKTLSASLSQYDNFNNQMPLRHANANSGSAQRSILCGRTSLISAFL 287

Human   372 IAVLL 376
            .|:||
  Fly   288 AAILL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIRPGNP_061026.2 IgV_SIRP 33..143 CDD:319346
IgC_SIRP_domain_2 145..248 CDD:319314 24/103 (23%)
IgC_SIRP_domain_3 250..353 CDD:319334 21/118 (18%)
beat-VaNP_001189214.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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