DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIRPG and Sirpb1c

DIOPT Version :9

Sequence 1:NP_061026.2 Gene:SIRPG / 55423 HGNCID:15757 Length:387 Species:Homo sapiens
Sequence 2:NP_001166930.1 Gene:Sirpb1c / 100038947 MGIID:3807521 Length:391 Species:Mus musculus


Alignment Length:391 Identity:218/391 - (55%)
Similarity:279/391 - (71%) Gaps:18/391 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     6 SWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGV 70
            :|.|.|...|||.||||| :.|...||::|||.|...|..|.:|||:|||||||||||:.||:||
Mouse     6 AWTHIPHCVLLLILLLGL-KGAAMRELKVIQPVKSFFVGAGGSATLNCTVTSLLPVGPIRWFKGV 69

Human    71 GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPE-NVEFKS 134
            |..|.|||:.....|||:|.|||:|||:|:|||||||::||||.||||||||::|..| ::|.:|
Mouse    70 GQSRLLIYSFTGERFPRITNVSDVTKRSNLDFSIRISNVTPADSGTYYCVKFQRGPSEPDMEIQS 134

Human   135 GPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPT 199
            |.|||:::.||||:|:|.|||||..|:.||:|||.||||.||::||||||||||:|..:|:|:|.
Mouse   135 GGGTELSVFAKPSSPMVSGPAARAVPQQTVAFTCRSHGFFPRNLTLKWFKNGNEISHLETSVEPE 199

Human   200 GQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRVPPTLEVTQQPMRVG 264
            ..||:|.:.||.:|||:|.|||||:||||.||||...||||.|::||.|:||||||::|||..|.
Mouse   200 ETSVSYRVSSTVQVVLEPRDVRSQIICEVDHVTLDRAPLRGIAHISEFIQVPPTLEISQQPTMVW 264

Human   265 NQVNVTCQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTYNWTSWFLVNISDQRDDVVLTC 329
            |.:.||||::||||...|:||.||||:.:||...||..||||||||.|..|||||...:::|:||
Mouse   265 NVIIVTCQIQKFYPPRFQVTWLENGNISRREVPFTLIVNKDGTYNWISCLLVNISALEENMVVTC 329

Human   330 QVKHDGQLAVSKRLALEVTVHQKDQSSDATPGPASSLTALLLIAVLLGP----------IYVPWK 384
            ||:||||..|.:...:.||.||:.:.. .|.|     .|.:.:|||||.          ||:..|
Mouse   330 QVEHDGQAEVIETHTVVVTEHQRVKEL-KTAG-----IAKIPVAVLLGSKILLLIAATVIYMRKK 388

Human   385 Q 385
            |
Mouse   389 Q 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIRPGNP_061026.2 IgV_SIRP 33..143 CDD:319346 67/110 (61%)
IgC_SIRP_domain_2 145..248 CDD:319314 65/102 (64%)
IgC_SIRP_domain_3 250..353 CDD:319334 58/102 (57%)
Sirpb1cNP_001166930.1 IG_like 42..119 CDD:214653 51/76 (67%)
V-set 45..142 CDD:284989 62/96 (65%)
Ig 141..252 CDD:299845 68/110 (62%)
IgC 247..341 CDD:143166 55/93 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83971949
Domainoid 1 1.000 146 1.000 Domainoid score I34754
eggNOG 1 0.900 - - E1_2BRY5
HGNC 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 449 1.000 Inparanoid score I12964
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG36121
OrthoDB 1 1.010 - - D114611at9347
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19971
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1115
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.870

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