DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NPY4R and XB996286

DIOPT Version :10

Sequence 1:NP_005963.4 Gene:NPY4R / 5540 HGNCID:9329 Length:375 Species:Homo sapiens
Sequence 2:XP_017951279.1 Gene:XB996286 / 100491805 XenbaseID:XB-GENE-996287 Length:376 Species:Xenopus tropicalis


Alignment Length:339 Identity:177/339 - (52%)
Similarity:235/339 - (69%) Gaps:10/339 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    32 EHCQDSVDVMVFIVTSYSIETVVGVLGNLCLMCVTVRQKEKANVTNLLIANLAFSDFLMCLLCQP 96
            :.|....|:..|:.|:||:.|::|:|||:.||.|..||||:.|||::|||||||||.|:|..|.|
 Frog    23 QKCGQHPDMTPFLGTAYSLVTILGLLGNISLMYVICRQKERGNVTHILIANLAFSDVLVCAFCLP 87

Human    97 LTAVYTIMDYWIFGETLCKMSAFIQCMSVTVSILSLVLVALERHQLIINPTGWKPSISQAYLGIV 161
            .|||||:||||:||.:|||::.|:||.|||||:|.|||:|.||:|||::|||||||:.|||..::
 Frog    88 FTAVYTVMDYWVFGLSLCKITNFLQCASVTVSVLILVLIAFERYQLILHPTGWKPSVLQAYAAVL 152

Human   162 LIWVIACVLSLPFLANSILENVFHKNHSKALEFLADKVVCTESWPLAHHRTIYTTFLLLFQYCLP 226
            |:||||.:|:.|..::.:|.:..:||.||.:.|||||.||.|||........||..|.|.||.:|
 Frog   153 LVWVIASLLAFPLASSMVLTDTPNKNISKVIGFLADKSVCVESWSSNQQLVAYTISLQLLQYIVP 217

Human   227 LGFILVCYARIYRCLQRQGRVFHKGTYSLRAGHMKQVNVVLVVMVVAFAVLWLPLHVFNSLEDWH 291
            |.|||.||.||...|:.:|.:|.:..     .||::||::.|:||.||||.|||.|:||.:.|||
 Frog   218 LCFILGCYLRISVHLKHRGAMFGRND-----NHMRRVNLMFVIMVGAFAVCWLPFHIFNIIVDWH 277

Human   292 HEAIPICHGNLIFLVCHLLAMASTCVNPFIYGFLNTNFKKEIKALVLTC-----QQSAPLEESEH 351
            |:.||:|:.||||.:||||||.||||||.|||.||:|.|:|:||||..|     ...:.:||.|.
 Frog   278 HQLIPVCYHNLIFSLCHLLAMISTCVNPVIYGLLNSNVKREVKALVQNCTGRKLDTRSAVEEPER 342

Human   352 LPLSTVHTEVSKGS 365
            .|||...:....||
 Frog   343 YPLSLKQSATLPGS 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NPY4RNP_005963.4 7tmA_NPY4R 42..333 CDD:320519 161/290 (56%)
TM helix 1 43..69 CDD:320519 12/25 (48%)
TM helix 2 76..101 CDD:320519 16/24 (67%)
TM helix 3 114..144 CDD:320519 19/29 (66%)
TM helix 4 155..176 CDD:320519 10/20 (50%)
TM helix 5 211..240 CDD:320519 15/28 (54%)
TM helix 6 258..288 CDD:320519 17/29 (59%)
TM helix 7 301..326 CDD:320519 19/24 (79%)
XB996286XP_017951279.1 7tm_GPCRs 34..319 CDD:475119 161/289 (56%)
TM helix 1 35..59 CDD:320519 11/23 (48%)
TM helix 2 68..90 CDD:320519 13/21 (62%)
TM helix 3 106..128 CDD:320519 13/21 (62%)
TM helix 4 149..165 CDD:320519 6/15 (40%)
TM helix 5 203..226 CDD:320519 12/22 (55%)
TM helix 6 250..272 CDD:320519 13/21 (62%)
TM helix 7 287..312 CDD:320519 19/24 (79%)

Return to query results.
Submit another query.