DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AVPR2 and avpr2

DIOPT Version :9

Sequence 1:NP_000045.1 Gene:AVPR2 / 554 HGNCID:897 Length:371 Species:Homo sapiens
Sequence 2:XP_004916778.1 Gene:avpr2 / 100487051 XenbaseID:XB-GENE-482287 Length:361 Species:Xenopus tropicalis


Alignment Length:345 Identity:193/345 - (55%)
Similarity:243/345 - (70%) Gaps:12/345 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    30 DTRDPLLARAELALLSIVFVAVALSNGLVLAALARRGRRGHWAPIHVFIGHLCLADLAVALFQVL 94
            |.|||::|:..:|:|:::|......|.|||..|.|  ||.|.|.:|.|:.|||||||.|:.||||
 Frog    20 DKRDPIVAQWNIAMLAVIFSFATFGNCLVLFTLLR--RRKHNALMHTFMIHLCLADLVVSFFQVL 82

Human    95 PQLAWKATDRFRGPDALCRAVKYLQMVGMYASSYMILAMTLDRHRAICRPMLAYRHGSGAHWNRP 159
            |||.|..||||||||.|||.|:|||:||||||||||:|||.|||:||||||:.::.|| |.||.|
 Frog    83 PQLVWDITDRFRGPDVLCRGVRYLQVVGMYASSYMIVAMTFDRHQAICRPMMTFKKGS-ARWNIP 146

Human   160 VLVAWAFSLLLSLPQLFIFAQRNVEGGSGVTDCWACFAEPWGRRTYVTWIALMVFVAPTLGIAAC 224
            |.:||..|.:.||||.|||::  :|...||.||||.|.||||.:.|||||.|.||:.|.|.||.|
 Frog   147 VSLAWLASAIFSLPQGFIFSR--IEVHPGVFDCWATFIEPWGLKAYVTWITLAVFILPALFIATC 209

Human   225 QVLIFREIHASLVPGPSERPGGRRRGR----RTGSPGEG-AHVSAAVAKTVRMTLVIVVVYVLCW 284
            |||||||||.|:..||...|..||:.:    |.|:..:. ..||:|:|||||||||||:|||:||
 Frog   210 QVLIFREIHNSINMGPGHSPRPRRKAKLINTRNGARSQSDTGVSSAMAKTVRMTLVIVLVYVVCW 274

Human   285 APFFLVQLWAAWDPEAPLEGAPFVLLMLLASLNSCTNPWIYASFSSSVSSELRSLLCCA-RGRTP 348
            ||||:.|||..|:.|:....:...:||:|||||||||||||..||||||.:::.:||.| |.|..
 Frog   275 APFFIAQLWNVWNQESAAGSSAIKVLMILASLNSCTNPWIYTIFSSSVSKDVKEILCFACRPRQR 339

Human   349 PSLGPQDESCTTASSSLAKD 368
            .:..|:| ||.|.|:::.|:
 Frog   340 KNSLPED-SCFTGSTTVPKE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AVPR2NP_000045.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 193/345 (56%)
7tmA_V2R 45..326 CDD:320510 167/285 (59%)
TM helix 2 74..101 CDD:320510 18/26 (69%)
TM helix 3 112..142 CDD:320510 23/29 (79%)
TM helix 4 155..176 CDD:320510 11/20 (55%)
TM helix 5 202..231 CDD:320510 18/28 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..259 6/22 (27%)
TM helix 6 264..294 CDD:320510 23/29 (79%)
TM helix 7 304..326 CDD:320510 14/21 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..371 7/20 (35%)
avpr2XP_004916778.1 7tmA_V2R 31..325 CDD:320510 176/298 (59%)
TM helix 1 31..55 CDD:320510 9/25 (36%)
TM helix 2 62..89 CDD:320510 18/26 (69%)
TM helix 3 100..130 CDD:320510 23/29 (79%)
TM helix 4 142..163 CDD:320510 11/20 (55%)
TM helix 5 187..216 CDD:320510 18/28 (64%)
TM helix 6 254..284 CDD:320510 23/29 (79%)
TM helix 7 294..319 CDD:320510 15/24 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 327 1.000 Domainoid score I8233
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20064
Inparanoid 1 1.050 371 1.000 Inparanoid score I9524
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG40236
OrthoDB 1 1.010 - - D205853at32523
OrthoFinder 1 1.000 - - FOG0000774
OrthoInspector 1 1.000 - - oto155398
Panther 1 1.100 - - LDO PTHR24241
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3458
SonicParanoid 1 1.000 - - X456
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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