Protein Alignment rnf130 and rnf130

DIOPT Version :9

• Sequence 1: XP_009289393.1
• Gene: rnf130 / 553950
• ZFINID: ZDB-GENE-050522-525
• Length: 428
• Species: Danio rerio
• Sequence 2: NP_001107712.1
• Gene: rnf130 / 100124963
• XenbaseID: XB-GENE-949564
• Length: 419
• Species: Xenopus tropicalis
• Alignment Length: 407
• Identity: 273/407 - (67%)
• Similarity: 335/407 - (82%)
• Gaps: 7/407 - (1%)

Zfish    13 SCLLALLLAFVSPRCSLSIGADKTMVNKEDYYSAIVNATVLDHKGNPQQMVTKNDGRYGQNSPKT 77
            :||..|:|   .|...:..|:|  ..|.|: |||:||.|:.|...|| .::..:.||||.:||||
 Frog    11 NCLPILVL---FPCSMVQSGSD--TANMEN-YSALVNVTIQDPSSNP-VLLRIDGGRYGLDSPKT 68

Zfish    78 EAKGIVVAPAAVNGAVDLQGCCPHTRFIVPPKTTHWVAIMQRGKCTFKEKILKAAAFNASAVIIY 142
            ||||:::.|..::||.|..||.|.|||.|||.|.||:|::|||.||||||||:||:.|||||:||
 Frog    69 EAKGLLLTPVHIHGAADRLGCDPQTRFNVPPNTKHWIALLQRGNCTFKEKILRAASHNASAVVIY 133

Zfish   143 NNNTKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEKNQTVLVSVIVGSRGMPKNINRGSLVFV 207
            |||:||:||||.|:|||:|||:||:|:.|:|||.::|:|.:||:::.||||...||.:|||||||
 Frog   134 NNNSKEETVTMTHQGTGEIVAIMISEARGREILSYVERNISVLMAIAVGSRNQHKNFSRGSLVFV 198

Zfish   208 SISFIVLMIISSAWLIFYFIQKIRDTSARDRSQRRLGDAAKKAISKLTTRTVKRGDKETEPDFNH 272
            ||||||||||||||||||||||||.||||||:||||||||||||.||||||||:|||||:|||:|
 Frog   199 SISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDH 263

Zfish   273 CAVCIEGYQLNDVVRILPCKHVFHKMCVDPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMAFDM 337
            ||||||.|:.||:||:|||||||||:||||||:|||||||||||||||||:..|:||.||:||||
 Frog   264 CAVCIESYKQNDIVRVLPCKHVFHKVCVDPWLSEHCTCPMCKLNILKALGIAANVPCTDNVAFDM 328

Zfish   338 DRMSRSQTSSQRTALVDLSSETSISLEPLRHSSSSQLPSDEELIPRSGEINIAVTKEWFIVASFG 402
            :|::|||..|:|:|..|.:.|.|:|||.||.|..||.|.|.|.|||:|||||:|||||||:||||
 Frog   329 ERLTRSQPPSRRSAPNDPTEEGSLSLESLRSSRISQGPHDVEAIPRTGEINISVTKEWFIIASFG 393

Zfish   403 VLSALTLCYMIIRATAS 419
            :|||||||||||:||||
 Frog   394 LLSALTLCYMIIKATAS 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf130	XP_009289393.1	PA_GRAIL_like	49..188	CDD:239037	81/138 (59%)
		zf-RING_2	271..314	CDD:290367	34/42 (81%)
rnf130	NP_001107712.1	PA_GRAIL_like	41..179	CDD:239037	82/137 (60%)
		HRD1	<197..344	CDD:227568	122/146 (84%)
		RING_Ubox	262..310	CDD:388418	38/47 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	152	1.000	Domainoid score	I17632
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H41267
Inparanoid	1	1.050	540	1.000	Inparanoid score	I6004
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0000832
OrthoInspector	1	1.000	-	-		oto78845
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X295
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	8.060