Sequence 1: | XP_009289393.1 | Gene: | rnf130 / 553950 | ZFINID: | ZDB-GENE-050522-525 | Length: | 428 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107712.1 | Gene: | rnf130 / 100124963 | XenbaseID: | XB-GENE-949564 | Length: | 419 | Species: | Xenopus tropicalis |
Alignment Length: | 407 | Identity: | 273/407 - (67%) |
---|---|---|---|
Similarity: | 335/407 - (82%) | Gaps: | 7/407 - (1%) |
- Green bases have known domain annotations that are detailed below.
Zfish 13 SCLLALLLAFVSPRCSLSIGADKTMVNKEDYYSAIVNATVLDHKGNPQQMVTKNDGRYGQNSPKT 77
Zfish 78 EAKGIVVAPAAVNGAVDLQGCCPHTRFIVPPKTTHWVAIMQRGKCTFKEKILKAAAFNASAVIIY 142
Zfish 143 NNNTKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEKNQTVLVSVIVGSRGMPKNINRGSLVFV 207
Zfish 208 SISFIVLMIISSAWLIFYFIQKIRDTSARDRSQRRLGDAAKKAISKLTTRTVKRGDKETEPDFNH 272
Zfish 273 CAVCIEGYQLNDVVRILPCKHVFHKMCVDPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMAFDM 337
Zfish 338 DRMSRSQTSSQRTALVDLSSETSISLEPLRHSSSSQLPSDEELIPRSGEINIAVTKEWFIVASFG 402
Zfish 403 VLSALTLCYMIIRATAS 419 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnf130 | XP_009289393.1 | PA_GRAIL_like | 49..188 | CDD:239037 | 81/138 (59%) |
zf-RING_2 | 271..314 | CDD:290367 | 34/42 (81%) | ||
rnf130 | NP_001107712.1 | PA_GRAIL_like | 41..179 | CDD:239037 | 82/137 (60%) |
HRD1 | <197..344 | CDD:227568 | 122/146 (84%) | ||
RING_Ubox | 262..310 | CDD:388418 | 38/47 (81%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 152 | 1.000 | Domainoid score | I17632 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H41267 | |
Inparanoid | 1 | 1.050 | 540 | 1.000 | Inparanoid score | I6004 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1487241at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | oto78845 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.060 |