| Sequence 1: | NP_001018174.2 | Gene: | lrit1a / 553943 | ZFINID: | ZDB-GENE-040924-5 | Length: | 643 | Species: | Danio rerio |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001137799.1 | Gene: | DIP-epsilon / 7354433 | FlyBaseID: | FBgn0259714 | Length: | 467 | Species: | Drosophila melanogaster |
| Alignment Length: | 622 | Identity: | 120/622 - (19%) |
|---|---|---|---|
| Similarity: | 186/622 - (29%) | Gaps: | 226/622 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Zfish 3 LTVFLGLLLASGGFPLVRSTCPTQCSCFYHNLSDGSRARSVICNDPEIS------LVPASFPGDT 61
Zfish 62 SKLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSFPWES 126
Zfish 127 LMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTIKPTLGAESSK 191
Zfish 192 LILGLHDN--------PWLCDCRL------YDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFS 242
Zfish 243 DAELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGVPIPELAWRRADGKP--LNGTVLLENSKEG 305
Zfish 306 IVWSILSVPAVSYRDTGKYICKATN-YAGSAEAVISLIINDAPKMENP------------TLDPK 357
Zfish 358 PKLKSKKPNTMVKAAYQEKHIATYVSPTPKNGLPLSGTVSY-TGPYPGMESDNAANSRMNTQTAS 421
Zfish 422 PDGFLETNLSNLAANTSSLQQDPDRVVRSVKVIGDTDYTVCLNWRAP----------TAKNTTAF 476
Zfish 477 SVLYAVFGERDMRRINVSPGNNRIVIEGLVPKTKYIAC--VCVKGL-----IPKKEQCVI----- 529
Zfish 530 -FSTDAAASANGTQKLINVVVITVACVIAVPLTVIVC 565 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lrit1a | NP_001018174.2 | leucine-rich repeat | 61..84 | CDD:275378 | 4/22 (18%) |
| LRR_8 | 63..119 | CDD:290566 | 7/55 (13%) | ||
| LRR_RI | <77..175 | CDD:238064 | 9/97 (9%) | ||
| leucine-rich repeat | 85..108 | CDD:275378 | 3/22 (14%) | ||
| LRR_8 | 108..167 | CDD:290566 | 5/58 (9%) | ||
| leucine-rich repeat | 109..132 | CDD:275378 | 0/22 (0%) | ||
| leucine-rich repeat | 133..156 | CDD:275378 | 4/22 (18%) | ||
| leucine-rich repeat | 157..170 | CDD:275378 | 0/12 (0%) | ||
| LRRCT | 199..243 | CDD:214507 | 6/57 (11%) | ||
| I-set | 252..343 | CDD:254352 | 24/93 (26%) | ||
| Ig | 259..333 | CDD:299845 | 22/76 (29%) | ||
| fn3 | 448..515 | CDD:278470 | 19/78 (24%) | ||
| DIP-epsilon | NP_001137799.1 | IG_like | 59..155 | CDD:214653 | 24/179 (13%) |
| Ig | 69..139 | CDD:143165 | 18/150 (12%) | ||
| IG_like | 165..249 | CDD:214653 | 27/120 (23%) | ||
| IGc2 | 172..237 | CDD:197706 | 22/85 (26%) | ||
| IG_like | 267..348 | CDD:214653 | 19/115 (17%) | ||
| Ig | 270..339 | CDD:299845 | 16/103 (16%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||